Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7362 |
Symbol | |
ID | 8338732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8545103 |
End bp | 8546977 |
Gene Length | 1875 bp |
Protein Length | 624 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644960443 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003118030 |
Protein GI | 256396466 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.942718 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGGAT CCGTGGACAA CGCCGCCGCT GCCGCCGCCG AGGACTTCTT AGTCCGCATC GCGGGGCAGA CCGTGCCCTC CTTGCTGGAG CGCAACGCGG TCGAGTTCGG GGATCGGGCG GCGATCACCA GTGCCCCGGA TGCGAACGGC GATACCAGCA CACTGACGTG GACCAAGCTG CGGGAGCGCG CCGCGGAGTT CTCCGAAGGG CTGGTCGCGC TCGGGCTGGA GCCCGGGGAC CGGATGCTCA CCATGATGTC CAGCCGGCTC GAGCACTGGA TCGCCGACCA CGGCGCCCAG CACGCCCGCG CCATCCCCTG TACCGCCTAC GCGACCCTGT CCACCGAGCA GATCGGCTTC GTCGCCGCGC ACAGCGCCGC GCCGATCGTG GTGCTGGAGG GCCGGCACGA GATCGAGCGC TGGCAGCCGA TCCTGGCCGG ACTGCCCGCC CTGCGCCACG TCATCGTGGT CGAGGAGGCT GACTGCGTCG TCACCGGCGA GGACGCGCAC GGCAAGCAGT TCCTGCCCTA CAGCGCCGTG CTGGCCATCG GCCGCGAGCG CCTGGCGGAC AATCCGAGCC TGTTCGAGCA GCGCTGGAAG CAGATCCGGC CAGAGGACCC GGTCGGCATG ATGTACACCT CCGGCACCAC TGGGGACCCC AAGGGCGTCG TGCTCACCCA CCTCAATGTG CTGTACGAGG CGGTGGTCGT CGACGCCATC ACCTCGATCG AGGACTTCCC CGACACCATC GCCTACCTGC CGCTGGCGCA CATCGCCGAG CGCGAGCTCA GCCTCTACGG CTCGGTCATG AAGACCGCGC ACGTCCATCT GTGCCCCGAC CCGCGCCAGG TCGTCGGCGC GCTCGGCCGG GTCCATCCCG CCGGGCTGTT CGGCGTGCCG CGTATCTGGG AGAAGCTCGC CGCGGGCGTC CAAGGCCTGG TGAAGGGTGC CGAGCCGGCG CAGCGCGAGG CGTTCGAGAA GGCGCACGCG GTCACGCTGG AGGCCGCCGA GCTGGAAGCG GCCGGCAAGC AGGTCCCGGA GGAGTTGGCG CGCGCCGTCG AGGAGGCGGA CCGCACCGTG CTGGCGCCCA CCCGCTCGCT CCTCGGCCTG GACCGCGTCA CGCGCGCCAC CAGCGGCGCG GCGCCGATCT CGGTGGAGAC CCTGCGCTTC CTGCACGGCT TGGGCGTCCC GCTGATGGAG GTCTGGGGCA TGTCCGAGAC CAGCGGCGCG GCGACGGTCT GCACGCCGGA CGCGAACCGC GTCGGCACCG TCGGCAAGCC GATCCCGGGC GTGGAGCTGA AGATCGGCGA GGCCGGCGAG GTGTTCGCCC GCGGCCCGAT CATGCTCGCC GGCTACCTCC AGCCGGACGG CAGCGTGCTC TCCCCGCTGG ACGACGAGGG CTGGCTGGCC ACCGGCGACG TCGGCACGCT GGACGCCGAC GGCTTCCTGA CCATCACCGA CCGCAAGAAG GAACTCATCA TCACCTCCGG CGGCAAGAAC ATCGCCCCGA CGCTGATCGA GAGCCACCTG ACCGCGCACC CCGCCATCGG CTTCGCCGTC GCGATCGGCG ACCGCCGCCC CTACGTCACG GCCCTGATCG TCCTGGACCC GGACGTGTTC TCCGCCGACG CCGCGCACTC CGCCGAAGCC CGCGCCGCGG TGGACCGGGC GGTGGCGACC GCGAACGCCA AGCTCTCGCG CGTCGAGCAG GTGAAGAAGT ACACGATCGT CCCCGGGCCG TGGACTCCGG ACACCGGTGA GGTCACCCCG AAGCTGAGCC TGCGCCGCAG AGTGATCGCC GAACGCTACG CAGGCGTCAT CGACGAGATG TACCTGGCGC CCCCAGCGGA CGGCGAAGAG GAGATTCACG CGTAG
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Protein sequence | MTGSVDNAAA AAAEDFLVRI AGQTVPSLLE RNAVEFGDRA AITSAPDANG DTSTLTWTKL RERAAEFSEG LVALGLEPGD RMLTMMSSRL EHWIADHGAQ HARAIPCTAY ATLSTEQIGF VAAHSAAPIV VLEGRHEIER WQPILAGLPA LRHVIVVEEA DCVVTGEDAH GKQFLPYSAV LAIGRERLAD NPSLFEQRWK QIRPEDPVGM MYTSGTTGDP KGVVLTHLNV LYEAVVVDAI TSIEDFPDTI AYLPLAHIAE RELSLYGSVM KTAHVHLCPD PRQVVGALGR VHPAGLFGVP RIWEKLAAGV QGLVKGAEPA QREAFEKAHA VTLEAAELEA AGKQVPEELA RAVEEADRTV LAPTRSLLGL DRVTRATSGA APISVETLRF LHGLGVPLME VWGMSETSGA ATVCTPDANR VGTVGKPIPG VELKIGEAGE VFARGPIMLA GYLQPDGSVL SPLDDEGWLA TGDVGTLDAD GFLTITDRKK ELIITSGGKN IAPTLIESHL TAHPAIGFAV AIGDRRPYVT ALIVLDPDVF SADAAHSAEA RAAVDRAVAT ANAKLSRVEQ VKKYTIVPGP WTPDTGEVTP KLSLRRRVIA ERYAGVIDEM YLAPPADGEE EIHA
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