Gene Caci_7340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7340 
Symbol 
ID8338710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8522720 
End bp8524849 
Gene Length2130 bp 
Protein Length709 aa 
Translation table11 
GC content70% 
IMG OID644960421 
ProductProlyl oligopeptidase 
Protein accessionYP_003118008 
Protein GI256396444 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1505] Serine proteases of the peptidase family S9A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0021168 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGTCTT TTGTATACCC GCAGGCAGAG CGCCTCACCG TGGCAGATCG CCTGCATGGC 
CGCGACGTCC CCGACCCCTA CCGCTGGCTC GAGGACCCGC GGGATCCGCG GACCGTGGCC
TGGAGCGAAT CCCAGGAGGC GCTGTTCTCC GCCGCGCGCG AGGGCTGGCC GGCCACCCAG
AGGTTCGCCG AGCGGATGAC CGAGCTGATG GGCACCGGCG ACGTCTCGGC GCCCTCCTGG
CGCGGCGAGC GCCGTTTCCT GACCCGGCGG CTGCCGGAGC AGGAGCACGC GGTGCTGCTC
GCTGTGGAGG CGGACGGAAC CGAGCGGGTA CTGGTCGACC CGATGGCGCT GGACCCCTCC
GGCACCACGA CGTTGGACGG CTGGCAGCCC TCGAAGGAAG GCGACCGCCT CGCCTATCAG
CTCTCGGAGG GCGGGACCGA GGAGTCGGCC GTCTATGTGA TCGACGTCGG CACACTGGAG
CGCCTCGAAG GCCCGATCAC CCGCGCCCGG TACACGCCGG TGGCCTGGCT GCCCGGCGGC
GAGGCCTACT ACTACGTCCG CAAGCCGCAC CCCGACACCG TTCCCGAGGG GGAGCAACAG
TTCCACCGGC GGGTGAAGCT GCACAAGGTC GGGACCGATC CCGAGGTCGA GGACGTCGAG
ATCTTCGGCG CGGGCCAGCC GAAGACCAGC TACTTCGGGA TCTCGGTGAC CCTCGACGGC
CGCTGGCTGA AGGTGGAGAC CTACCCCGGG ACGGCTCCGC GCAACGACCT CTATCTCGCC
GATCTGACCG CGAGCTCCCC CGAGCGCCCC GTGCTGTCCC CGGTCCAGGT CGGGCTCGAC
AACCAGACCT CGATCGAGAT CTGCGCGCCC GACTCCCCGC TGGCCGGCAG TGTCCTGGTG
TGGACCGACC GGGACGCCCC GCGCGGCCGG ATCTGCGTGG CCGCGGTCGG TGATCTCGCC
TATGAGAACT GGCGAGAGCT GGTCCCTGAG GACCCCGAGG CGGTCCTGGA CTCCTACGCG
CTGCTGGACG GCCCGGAGTT GGAGCGGCCG CTGCTGGTCG TGGCCCGCAC CCGGCACGCG
GTCGGCGAGC TGGCGCTGCA CGACGCCCGC ACCGGCGAGA AGATCGGCGA GATCGCGCTG
CCGGGGCTGG GGACGCTGTA TGGGCTGAGC ACCCGGCCCG AGCGCGGCCA CGAGCTGTGG
TTCGGCTACA CCGACTTCAC CACTCCGGTG CAGATCCACC ACTTCGACGC CCGCACCGGC
CAGACCGCGC TGTGGGAGCG GCCGCCGGCC GAGGTGGAGA TCCCGCAGGT CCGCACACGG
CAGGTCACGT ACGCCTCCAA GGACGGTACT GAGGTGCGGA TGTTCGTCAT CGAGGGCAGC
GAGGAAAGCA CCGGTCCCAA GCCGACGATC CTCTACGGCT ACGGCGGCTT CAACATCCCG
CAGACCCCGG CCTACAGCGC CCGCATCCTG GCCTGGGTCG CAGCAGGCGG CGTCTACGCC
GTCGCGAACC TGCGGGGCGG GTCCGAGGAA GGCGAGGAGT GGCACCGCGC CGGGATGATG
GAGAACAAGC AGAACGTCTA CGACGACTTC CACGCCGCCG GCGACTGGCT GGTCGACAAC
GGCGTCACCA CCCGCGCGCA GCTCGGGATC TTCGGCGGTT CCAACGGCGG GCTGCTGGTC
GGCGTGGCGC TGACCCAGCA CCCTGAGAAG TACGCGGCCG TGGTCTGCTG GGCGCCGCTG
CTGGACATGA TCCGCTATGA ACAGCACGGC CTCGGCATCA CCTGGAACGA GGAGTACGGC
ACTGTCGAGG ACCCCGAGCA GTTCGGCTGG CTGATCGCGT ACTCGCCGTA CCACAACGTG
CACGAGGGCA CCGCGTATCC GGCGACGCTG TTCGCCGTCT TCGACAGCGA CAGCCGGGTC
GACCCGCTGC ACGCCCGCAA ACTCGCCGCC GCCCTCCAGC ACGCCACCTC GGCGCCGATC
ACGGAGCGTC CGGTGCTGTT CCGCGCGGAG CGCGAGGCCG GCCACGCCGC CCGCAGCGTC
TCCAAAACGG TAGGCGTCTA CGCCGACATG TGGGGCTTCC TGGCCGCACA GCTCGAACTC
GAACTGACAC CGCGAGCCAT GCCAGTCTGA
 
Protein sequence
MPSFVYPQAE RLTVADRLHG RDVPDPYRWL EDPRDPRTVA WSESQEALFS AAREGWPATQ 
RFAERMTELM GTGDVSAPSW RGERRFLTRR LPEQEHAVLL AVEADGTERV LVDPMALDPS
GTTTLDGWQP SKEGDRLAYQ LSEGGTEESA VYVIDVGTLE RLEGPITRAR YTPVAWLPGG
EAYYYVRKPH PDTVPEGEQQ FHRRVKLHKV GTDPEVEDVE IFGAGQPKTS YFGISVTLDG
RWLKVETYPG TAPRNDLYLA DLTASSPERP VLSPVQVGLD NQTSIEICAP DSPLAGSVLV
WTDRDAPRGR ICVAAVGDLA YENWRELVPE DPEAVLDSYA LLDGPELERP LLVVARTRHA
VGELALHDAR TGEKIGEIAL PGLGTLYGLS TRPERGHELW FGYTDFTTPV QIHHFDARTG
QTALWERPPA EVEIPQVRTR QVTYASKDGT EVRMFVIEGS EESTGPKPTI LYGYGGFNIP
QTPAYSARIL AWVAAGGVYA VANLRGGSEE GEEWHRAGMM ENKQNVYDDF HAAGDWLVDN
GVTTRAQLGI FGGSNGGLLV GVALTQHPEK YAAVVCWAPL LDMIRYEQHG LGITWNEEYG
TVEDPEQFGW LIAYSPYHNV HEGTAYPATL FAVFDSDSRV DPLHARKLAA ALQHATSAPI
TERPVLFRAE REAGHAARSV SKTVGVYADM WGFLAAQLEL ELTPRAMPV