Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7340 |
Symbol | |
ID | 8338710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8522720 |
End bp | 8524849 |
Gene Length | 2130 bp |
Protein Length | 709 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960421 |
Product | Prolyl oligopeptidase |
Protein accession | YP_003118008 |
Protein GI | 256396444 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1505] Serine proteases of the peptidase family S9A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0021168 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGTCTT TTGTATACCC GCAGGCAGAG CGCCTCACCG TGGCAGATCG CCTGCATGGC CGCGACGTCC CCGACCCCTA CCGCTGGCTC GAGGACCCGC GGGATCCGCG GACCGTGGCC TGGAGCGAAT CCCAGGAGGC GCTGTTCTCC GCCGCGCGCG AGGGCTGGCC GGCCACCCAG AGGTTCGCCG AGCGGATGAC CGAGCTGATG GGCACCGGCG ACGTCTCGGC GCCCTCCTGG CGCGGCGAGC GCCGTTTCCT GACCCGGCGG CTGCCGGAGC AGGAGCACGC GGTGCTGCTC GCTGTGGAGG CGGACGGAAC CGAGCGGGTA CTGGTCGACC CGATGGCGCT GGACCCCTCC GGCACCACGA CGTTGGACGG CTGGCAGCCC TCGAAGGAAG GCGACCGCCT CGCCTATCAG CTCTCGGAGG GCGGGACCGA GGAGTCGGCC GTCTATGTGA TCGACGTCGG CACACTGGAG CGCCTCGAAG GCCCGATCAC CCGCGCCCGG TACACGCCGG TGGCCTGGCT GCCCGGCGGC GAGGCCTACT ACTACGTCCG CAAGCCGCAC CCCGACACCG TTCCCGAGGG GGAGCAACAG TTCCACCGGC GGGTGAAGCT GCACAAGGTC GGGACCGATC CCGAGGTCGA GGACGTCGAG ATCTTCGGCG CGGGCCAGCC GAAGACCAGC TACTTCGGGA TCTCGGTGAC CCTCGACGGC CGCTGGCTGA AGGTGGAGAC CTACCCCGGG ACGGCTCCGC GCAACGACCT CTATCTCGCC GATCTGACCG CGAGCTCCCC CGAGCGCCCC GTGCTGTCCC CGGTCCAGGT CGGGCTCGAC AACCAGACCT CGATCGAGAT CTGCGCGCCC GACTCCCCGC TGGCCGGCAG TGTCCTGGTG TGGACCGACC GGGACGCCCC GCGCGGCCGG ATCTGCGTGG CCGCGGTCGG TGATCTCGCC TATGAGAACT GGCGAGAGCT GGTCCCTGAG GACCCCGAGG CGGTCCTGGA CTCCTACGCG CTGCTGGACG GCCCGGAGTT GGAGCGGCCG CTGCTGGTCG TGGCCCGCAC CCGGCACGCG GTCGGCGAGC TGGCGCTGCA CGACGCCCGC ACCGGCGAGA AGATCGGCGA GATCGCGCTG CCGGGGCTGG GGACGCTGTA TGGGCTGAGC ACCCGGCCCG AGCGCGGCCA CGAGCTGTGG TTCGGCTACA CCGACTTCAC CACTCCGGTG CAGATCCACC ACTTCGACGC CCGCACCGGC CAGACCGCGC TGTGGGAGCG GCCGCCGGCC GAGGTGGAGA TCCCGCAGGT CCGCACACGG CAGGTCACGT ACGCCTCCAA GGACGGTACT GAGGTGCGGA TGTTCGTCAT CGAGGGCAGC GAGGAAAGCA CCGGTCCCAA GCCGACGATC CTCTACGGCT ACGGCGGCTT CAACATCCCG CAGACCCCGG CCTACAGCGC CCGCATCCTG GCCTGGGTCG CAGCAGGCGG CGTCTACGCC GTCGCGAACC TGCGGGGCGG GTCCGAGGAA GGCGAGGAGT GGCACCGCGC CGGGATGATG GAGAACAAGC AGAACGTCTA CGACGACTTC CACGCCGCCG GCGACTGGCT GGTCGACAAC GGCGTCACCA CCCGCGCGCA GCTCGGGATC TTCGGCGGTT CCAACGGCGG GCTGCTGGTC GGCGTGGCGC TGACCCAGCA CCCTGAGAAG TACGCGGCCG TGGTCTGCTG GGCGCCGCTG CTGGACATGA TCCGCTATGA ACAGCACGGC CTCGGCATCA CCTGGAACGA GGAGTACGGC ACTGTCGAGG ACCCCGAGCA GTTCGGCTGG CTGATCGCGT ACTCGCCGTA CCACAACGTG CACGAGGGCA CCGCGTATCC GGCGACGCTG TTCGCCGTCT TCGACAGCGA CAGCCGGGTC GACCCGCTGC ACGCCCGCAA ACTCGCCGCC GCCCTCCAGC ACGCCACCTC GGCGCCGATC ACGGAGCGTC CGGTGCTGTT CCGCGCGGAG CGCGAGGCCG GCCACGCCGC CCGCAGCGTC TCCAAAACGG TAGGCGTCTA CGCCGACATG TGGGGCTTCC TGGCCGCACA GCTCGAACTC GAACTGACAC CGCGAGCCAT GCCAGTCTGA
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Protein sequence | MPSFVYPQAE RLTVADRLHG RDVPDPYRWL EDPRDPRTVA WSESQEALFS AAREGWPATQ RFAERMTELM GTGDVSAPSW RGERRFLTRR LPEQEHAVLL AVEADGTERV LVDPMALDPS GTTTLDGWQP SKEGDRLAYQ LSEGGTEESA VYVIDVGTLE RLEGPITRAR YTPVAWLPGG EAYYYVRKPH PDTVPEGEQQ FHRRVKLHKV GTDPEVEDVE IFGAGQPKTS YFGISVTLDG RWLKVETYPG TAPRNDLYLA DLTASSPERP VLSPVQVGLD NQTSIEICAP DSPLAGSVLV WTDRDAPRGR ICVAAVGDLA YENWRELVPE DPEAVLDSYA LLDGPELERP LLVVARTRHA VGELALHDAR TGEKIGEIAL PGLGTLYGLS TRPERGHELW FGYTDFTTPV QIHHFDARTG QTALWERPPA EVEIPQVRTR QVTYASKDGT EVRMFVIEGS EESTGPKPTI LYGYGGFNIP QTPAYSARIL AWVAAGGVYA VANLRGGSEE GEEWHRAGMM ENKQNVYDDF HAAGDWLVDN GVTTRAQLGI FGGSNGGLLV GVALTQHPEK YAAVVCWAPL LDMIRYEQHG LGITWNEEYG TVEDPEQFGW LIAYSPYHNV HEGTAYPATL FAVFDSDSRV DPLHARKLAA ALQHATSAPI TERPVLFRAE REAGHAARSV SKTVGVYADM WGFLAAQLEL ELTPRAMPV
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