Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7290 |
Symbol | valS |
ID | 8338658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8470284 |
End bp | 8472932 |
Gene Length | 2649 bp |
Protein Length | 882 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960371 |
Product | valyl-tRNA synthetase |
Protein accession | YP_003117960 |
Protein GI | 256396396 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0525] Valyl-tRNA synthetase |
TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0570872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATGAAA CCACCAACTC CGCAGCCGCT CAGGGCGCCG CCGGCGCCGC CACCACTCTG CCGACCGCTT TCGTGCCGGT AGAGGTAGAG GGCGAGCTGT ACGAGCGGTG GGTAAAGAAC GGCTATTTCA CCGCTGACGC GGCTTCTGAC AAGGAGCCGT TCACCATCGT CATCCCGCCG CCGAACGTGA CCGGGTCGCT GCACGTGGGC CACGCGCTCA ACCAGTCGAT CCAGGACGCG ATCATCCGGC GCAAGCGGAT GCAGGGTTTC GAGGCGCTGT ACCTGCCGGG GATGGACCAT GCCGGTATCG CCACCCAGAA CGCGGTGGAG CGGGAGCTGG CCAAGGAAGG GCTGTCCCGG CACGACTTGG GCCGTGAGGC CTTTGTGCGC AAGGTGTGGG ACTGGAAGGC CGAGTACGGC GGGAAGATCC TGGGCCAGCA GCGGCGGCTG GGCATCTCCG TGGACTGGTC GCGTGAGCGG TTCACCATGG ACGAGGGCCT GTCCAAGGCT GTGCAGACCA TCTTCAAGAA GCTCTACGAG GACGGTCTGA TCTACCGCGC CGAGCGGATC ATCAACTGGT GTCCGCGCTG TCTGACCGCG CTGTCGGACA TCGAGGTGGA CCACTACGAC GAGCCCGGCG AGCTGGTGTC GATCCGCTAC GGCGACGGCG AGGACTCGAT CGTGGTGGCG ACCAGCCGCG CCGAGACCAT GCTCGGCGAC ACCGCGGTGG CCGTGCACCC CGACGACGAG CGCTACCGGC ACCTGATCGG CAAGGAGGTG GCGCTGCCGC TCACCGACCG CCGCATCCCG ATCGTCGCCG ACGAGCACGT GGACCCGGAG TTCGGGACCG GCGCGGTGAA GGTGACGCCG GCCCACGACC CGAACGACTT CGAGATCGGC CGCCGGCACA ACCTGCCGAT GCCCTCGATC CTGGACGAGC ACGCGAACAT CACCGTGCAC GGCCCGTTCC TGGGCATGGA CCGCTTCGAG GCGCGCCCGG CCGTGGTGGC CGCGCTGCGC GAGGACGGCC GCGTCGTCGG CCAGAAGCAG CTCCTGCGCC CGGTGGGCCA CTGCTCGCGC TGCGAGACCG TGGTGGAGCC GCGGCTGTCG ATGCAGTGGT GGGTGAAGGT GGAGCCGCTG GCCAAGGCCG CCGGCGACGC CGTGCGCGAC GGCCGCGTGC AGATCCACCC CAAGGAGATG GAGCCGCGCT ACTTCGCCTG GGTCGACAAC ATGCACGACT GGACGATCTC GCGCCAGCTG TGGTGGGGAC ACCGGATCCC GATCTGGTAC GGCCCGGACG GCGAGGTCGT GTGCGTGGGC CCGGACGAGG AGCCGCCGGC CGGCGCGGGC TGGCAGCAGG ACTCCGACGT GCTCGACACC TGGTTCTCCT CCGGGCTGTG GCCGTTCTCC ACGCTCGGCT GGCCGGAGCG GACCGCCGAT CTGGCGAAGT TCTATCCGAC CTCGGTGCTG CACACCGGCT ACGACATCAT CTTCTTCTGG GTCGCCCGGA TGATGATGTT CGGCCTGTAC GCCATGGACG GCAAGCAGCC CTTCGACAAG GTGGTCCTGT CCGGTCTGGT GCGCGACCAG TTCGGCAAGA AGATGTCGAA GTCCAAGGGC AACGGCGTGG ACCCGCTGGA GTGGATGGAC AAGTTCGGCT CCGACGCGGT GCGCTTCGGT CTGCTGCGCG GCGCCAACCC GGGCTCGGAC CAGGCCGTCG CAGAGGACTG GATCGCCGGT GCGCGCAACT TCGCGACCAA GATCTGGAAC GCCACGCGCT TCGCGATGAT GAACGGCGCG TACGTGCCCG CCGAGCTCCC GTCCGCCGAC CGGCTGACCG TCGAGGACCG CTGGATCCTG TCCCGCCTCA ACGAGGTGGT GGCCGAGGTG GACGCCCTCT ATGAGGACTT CCAGTTCGCC AAGGCCATGG AAGCCCTCTA CCACTTCGCG TGGGACGAAG TCTGCGACTG GTACATCGAG CTGTCCAAGC TGCGCCTGCC GATCGGTGTC GCACCCGACG ACCCAGACGC GCAGACCGCG CGCGCCGTGC TCGGCCACGT GCTGGACGTG ATGCTGCGCC TGCTGCACCC GGCCGTGCCG TACGTGACCG AGACGCTGTG GACCGCGCTC ACCGGCCGCG AGTCGGTCGT GATCGCCGAG TGGCCGGCCG CCGACCTGGC GCGGACCGAC AAGGCCGCCG AGGCGGTGAT CGAGGCCGTG CAGGAGGTCG TGACCGAGGT GCGCCGCTTC CGCACCGACC AGGGCGTGAA GGACGCGCAG CGGGTGGTCG CGCGGCTGAC GCTGACCGAC CCCAAGCTGG CCGGACAGGA GCCGGCGATC CGGCTGCTGA ACCGGCTCAC CGCCCCCGAG GACGGCTTCA GCGCCACCGC GACCCTGGCC GCGACCGGGG CGAAGGTGGA GCTGGACACC TCCGGCACGA TCGACGTCGC CGCCGAGCGC AAGCGGCTGG ACAAGGGTCT GGCCGCCGCG CGCAAGGAGG TCGAGCAGGC GAACGCCAAG CTCGGCAACG CCGATTTCCT GGCCAAGGCG CCCGACGCCG TGGTGGACAA GATCCGCAAG CGGCTGGCCG ACGCCGAGAG CGACATCGCC CGCCTGGGCG CTCAGCTCGA CGCGCTGCCG TCCGCTTAA
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Protein sequence | MNETTNSAAA QGAAGAATTL PTAFVPVEVE GELYERWVKN GYFTADAASD KEPFTIVIPP PNVTGSLHVG HALNQSIQDA IIRRKRMQGF EALYLPGMDH AGIATQNAVE RELAKEGLSR HDLGREAFVR KVWDWKAEYG GKILGQQRRL GISVDWSRER FTMDEGLSKA VQTIFKKLYE DGLIYRAERI INWCPRCLTA LSDIEVDHYD EPGELVSIRY GDGEDSIVVA TSRAETMLGD TAVAVHPDDE RYRHLIGKEV ALPLTDRRIP IVADEHVDPE FGTGAVKVTP AHDPNDFEIG RRHNLPMPSI LDEHANITVH GPFLGMDRFE ARPAVVAALR EDGRVVGQKQ LLRPVGHCSR CETVVEPRLS MQWWVKVEPL AKAAGDAVRD GRVQIHPKEM EPRYFAWVDN MHDWTISRQL WWGHRIPIWY GPDGEVVCVG PDEEPPAGAG WQQDSDVLDT WFSSGLWPFS TLGWPERTAD LAKFYPTSVL HTGYDIIFFW VARMMMFGLY AMDGKQPFDK VVLSGLVRDQ FGKKMSKSKG NGVDPLEWMD KFGSDAVRFG LLRGANPGSD QAVAEDWIAG ARNFATKIWN ATRFAMMNGA YVPAELPSAD RLTVEDRWIL SRLNEVVAEV DALYEDFQFA KAMEALYHFA WDEVCDWYIE LSKLRLPIGV APDDPDAQTA RAVLGHVLDV MLRLLHPAVP YVTETLWTAL TGRESVVIAE WPAADLARTD KAAEAVIEAV QEVVTEVRRF RTDQGVKDAQ RVVARLTLTD PKLAGQEPAI RLLNRLTAPE DGFSATATLA ATGAKVELDT SGTIDVAAER KRLDKGLAAA RKEVEQANAK LGNADFLAKA PDAVVDKIRK RLADAESDIA RLGAQLDALP SA
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