Gene Caci_7242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7242 
Symbol 
ID8338610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8419788 
End bp8421125 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content69% 
IMG OID644960323 
ProductErfK/YbiS/YcfS/YnhG family protein 
Protein accessionYP_003117912 
Protein GI256396348 
COG category[S] Function unknown 
COG ID[COG1376] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0270028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCACGTC AGCACGGCCG GGATGGTTCT GCGGGCGCCG CCCGTCGCGT CACCGTCCGG 
CCCGCGTGGC GTCGCGCCGC CCAGCTCACC GCGGTCGCCG CCGCGGCCAC GCTGCTGGCG
GCCGGCTGCG GCAGTTCGTC GGGCTCCAAG CCCTCGGCGG CGCATCCCGC CGGCAACGGC
GCCAGTTCGG CGCCCGGCGC GGCGGGCGGC TCGAGCTCGT CGGCGCCGAC CACGCCGTCG
GTGCCGGCGA CTCCGCTGGT GCTCAACGCC AAACCGGCCG ACGGCACGAC CGACGCCGAC
CCCTCGCAGG GGATCCAGCT CAGCGCCGCC GGCGGCAAGA TCGAGTCGGT GAGCGCGCAG
GACTCCAAGG GGAACAAGGT CGCCGGCACG CTCGCCGCCG ACGGCTCCTC CTGGGCCTCC
AGCGGGACGC TCAACATATC CAGCAGCTAC ACCGTGACCG GCAAGGCTCT GGACAGCACC
GGCGCCGAGA AGGACATCTC GGCGAAGTTC ACCACGCTGA CCCCGCAGAA GCGGCTCGGA
CTGCAGAGCT ACTTCCCGAA CGACGGCACG ACCGTCGGCG TCGGCCAGCC GGTGTCGGTG
ACCTTCACCA ACCCGCCGAA CGTCAAGGAC CGCGCCAACG TCGAGAAGGC GATGACGGTC
ACCACCACGC CCCATGTCGA GGGCGCGTGG AGCTGGATCA GCGCGACCCA GGTCGACTGG
CGCCCGCAGA ACTACTGGGC CTCCGGCACC AAGGTCTCGG TGCAGATGAA CCTCAACGGC
GTCAAGGCCG GCGACATCAC CTTCGGCTCG TTCACGAAGG GCTTCAACTT CACCGTCGGC
CGCGACCAGC GCGCCGTGGT GGACACGAAG CACTACATGA TGCACGTGTA CCAGGACGGC
AAGGACATCA AGGAGATCCC GACCGACACC GGTATGTCGG GATACAGCAC CTGGGGCGGC
ACGATGGTGG TGCTCGACAA GGAGCCCATG ATCGAGATGA AGTCCTGCTC GGTGCCGGGC
TTCAGCTGCA CCCCGGGGGT CGGTAACTAC TACGACCTCA AGGTCTACAA CGATGTCCAC
CTCACCAACT CGGGGACCTA CATCCACCAG GCGGAGTGGG ACAGCCACAT CGGTACGGAC
AACACCTCCC ACGGCTGCGT GCACTTGAAG CCCGCGGACG CGACCTGGTT CTACAACTTC
ATCCACGTCG GCGACCCGGT GACCATCAAC GGCGAGCCCG ACCAGGTGCA CACCGGCAAC
GGCTTCACCG ACTGGAACGA GAGCTGGAAG ACCTGGCTCG CCGGTTCCGC CGCGGGGCTT
TCGACCGCGG GGCAGTAA
 
Protein sequence
MARQHGRDGS AGAARRVTVR PAWRRAAQLT AVAAAATLLA AGCGSSSGSK PSAAHPAGNG 
ASSAPGAAGG SSSSAPTTPS VPATPLVLNA KPADGTTDAD PSQGIQLSAA GGKIESVSAQ
DSKGNKVAGT LAADGSSWAS SGTLNISSSY TVTGKALDST GAEKDISAKF TTLTPQKRLG
LQSYFPNDGT TVGVGQPVSV TFTNPPNVKD RANVEKAMTV TTTPHVEGAW SWISATQVDW
RPQNYWASGT KVSVQMNLNG VKAGDITFGS FTKGFNFTVG RDQRAVVDTK HYMMHVYQDG
KDIKEIPTDT GMSGYSTWGG TMVVLDKEPM IEMKSCSVPG FSCTPGVGNY YDLKVYNDVH
LTNSGTYIHQ AEWDSHIGTD NTSHGCVHLK PADATWFYNF IHVGDPVTIN GEPDQVHTGN
GFTDWNESWK TWLAGSAAGL STAGQ