| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7155 |
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| Symbol | |
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| ID | 8338523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8323219 |
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| End bp | 8326701 |
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| Gene Length | 3483 bp |
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| Protein Length | 1160 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644960236 |
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| Product | Glucodextranase N |
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| Protein accession | YP_003117825 |
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| Protein GI | 256396261 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | [TIGR01535] glucan 1,4-alpha-glucosidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0849564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.457795 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGGCA GATTCATTTC ACCACCCCGG GTCGGGCGGC GATGGCTGCG GTCGTCGCTG
TCCGCGTTCG CCGGGTTGTC GCTGGCCACT GTGGGAGTCT GGGCTTCGTC CAGTCCTGTG
GCGCGGGCTG GTACCGCGTC GGGGGGACCG GGGACGGCCT CGTTCTGGAA CGAGACCAGT
GGCGTGCAGG GGTTCGCCAC CGCGCTGAGT CCGAGTTCGA AGGTCTGGTA CACGCTGGGC
AACGGCGGGC TGGAGAACGT CTTCTATCCG CAGACCGACA ACCCGGACAC CTACGGGCTG
CAGTACTACG TCACCGACGG GTCGAGCTTC ACCGACGGCG AGGCCACCAA CACCAAGCAC
GCGATCGCCT TGGCCGATCC CGCCTCGCTG ACGTTCACGC AGACCAACAC CGCCGCCAGC
GGCAAGTATG CGATCACGAA GACCTACGTC GCCGATCCCG CGCGTTCGGT GATCCTGGTG
AAGACCACGT TCACCAACAA CGGCTCCACT CCGCTGTATC TGTACGCTGA TTACCTCCCC
CAGCTCAACA ACCAGGGCAT GGGCAACATC GGCTCCACCG ACGCCGGCGG GGACCTGGTC
GCCTCCAACG GCCCGATGGC CAGCGCACTG GCCGCGTCCA CCCCCTTCAG CAGTGCCTCG
ACCGGATACG TCGGCACCGC CAGCAGCGGT ACGGCGCAAC TGGCAACCGG CCACACGCTC
GGCACCGTCT ACAGCGGCGT CTCGAGCAGC GGCCACATCG ACCAGACCGC GCAAATCCCT
GTAGCCGCCT CGGGTTCGAC CACCTTCACC CTCGCGCTCG GCTTCGACAC GACCAGCGCC
GCGGCCGTCT CCGACGTGTC GGCGTCGCTG TCGTCGGGCT TCGCCGCCGT CCAGTCCTCC
TTCCAAGCTG GTTGGCACAC CTGGATGAGC GGCCTGACCA CCGCCCCGGC GTCGGTCGCG
AACAACGCCG GACTGCTGAC GCAGTACGAG ACCTCCTTGA TGGAGGTCAA GGCCGATGAG
GACAAGAACT ACGTCGGCGC GTTCGTCGCT GCTCCGGTCA CGCCCTGGGG CTCGACCGTC
AGCGCCGACG GAGGTGGCGG ACACGGCTAC CACCTGGTGT GGACGCGCGA CGAGTACCAG
ATGGCCAGCG CACTGCTGGC AGCCGGCGAC AAGCAGGACG CCAGCGACGC GCTGACCTAT
CTGGAGAACT ACGAGGAGAC CTCCAGCGGC CAGGTCAAAC AGAACACCTG GCTCAACGGG
AACGCGATGT GGGGCGGCAA CCAGCAGGAC GAGGAAGCCG ACCCCATCAT CCTGGCCTAC
CAGCTCGGCC GCACCGGCAG CGCCGACTTC GCCAAGATCA AGCTCCTGGC GTCCTTCATC
GCCGCCAACG GTCCGACCAC CGGGCAGGAG CGCTGGGAGG AGAACGGCGG CTACTCCCCC
GCCACCATCG CCTCCGAGAT CGCCGGCTTG GTGTGCGCGT CGAACATCGC CACCGCCAAC
GGCGATTCCG CGGACGCCGC CGCCTGGCTC GCCAAGGCGC AAAGCTGGGC CGGCAGCGTC
GCGGGGTGGA CCTACACCAC GAGCGGTCCC TACGGAAGCG GCTCCTACTT CCTGCGCCTC
ACCCCCGACG GCCAGCCCAA CTCGGGAGCC TCCATCGGTC TGGCCAACGG CGGCGGCAAC
CACGACGACC GCACCGTGGT CGACCAGAGC TTCCTGGACC TGGTACGCCT CGGCGTGATG
CCCGCCACCG CGAGTCAGGT CACGAACTCT CTCGCCGTCG ACGACGCGCA GATCGGTGTG
AACACCCCCG AAGGACAGAT CGACCACCGC TACGACTTCG ACGGCTACGG CGAAACCTCC
TCCGGAGCGG ACTACACCGG CGCCGGAACC GGCAATCCCT GGCCTGTGCT GACCGGTGAG
CGCGGCGAAT ACGACGTGGC GGCGGGCAAC CTGACCGGCG CGCAGTCCGC CCTGACCACC
ATGGCCGGCG CCGCGTCCGA CGGCCAGATC TCCGAGCAGG TGTGGGCCGG GACCAACGGC
ACCGGCGGCT TCAGCCTCGG CCGCCCCGAC AACTCCGCCA ACCCGCTGAT GTGGGCGATG
GCGCAGTACG TGCGCCTGGC GATGGACATC TCCGCGGGTC AGAACCTTGA TACCCCGACC
GTGGTCTGCC AGACGTTCAA CGCCTGCTCG GCAGCACCGA CGACGAAGCC CGCCGCGCCG
ACGAACCTGA CCGTCACCGC CACCCACACC ACCAACGTCT CGCTGTCCTG GTCCGGCTCT
TCGCTCGCGG CCGGCTACAA GGTGTACCGC GCGACCGGCA CCGGTCCGGC GGCGCTGGTC
GCCACGGTCG CATCGACCGC CTATACGGAC ACCAAGCTGA CCGCCTCCAC GGCCTACAGC
TACTCCGTGA CCGCGTACAA CAACGTCGGC GAGTCCGGAC CGTCCAATAC GGTCACGACC
ACCACCAAAA CCCCCGTCCC GCCGCCGAAC GCGCCGACCG GCCTCACGGT CTCCGCCGCC
GCCAGCACCA CGGTCGACCT GACGTGGACC GCAGCCACAG ACACCTCTGG TGGAACGGTC
GGCGGCTACA ACATCTACCG CGCCACCGGA ACCGGGACCG CAGCCCTGGT CGCCTCGACG
AGCGGCACCA GCTTCACGGA CACCGGTCTG ACGCCGTCCA CCGGCTACAC CTACTCCGTC
ACCGCGACCG ACACAGACGG AAACGAATCG GCCGCCTCGA ATTCCGTCAC CGCGACCACC
ACCGCGAACA ACGTCGAAGT GGTGACCGTG ACAGTCCCCT CATACACCGA TCAGACCGGA
CTGACCGTCT ACATGGCCGG GACGCTGTCC GCGCTCGGCG GCGGGCAAGG TGACTGGGCA
GCCAACGGCA TCGCGTTCAC CCGCGTGGAC GCCACGCACT GGCGCGCCAC CATCCACGCC
GCGGGTCCGA CCACGCTGTC GTACAAGTAC ACCCTCGGCG GTGCGTGGGC CAACGACGAG
GAGACCGCGT CCTGCGGCTA CGTGGGCAAC CGCAGCATGC AGATCAACGG CGGCACCGAG
GCCGATACCG TCGCCAACTG GGCAGGTCCC TACACCTGCG GCAGCTCGCC GCCGCCCCCT
CCCGGCGGCG GCACAGGCGG CAACGGCGGC ACCACCGAGA CGATCGCTGT GACAGTGCCC
GCCGACACCC CGGCGAGCGC CCAGGTCTAC CTCGCCGGCA ACCTGTCGGT CCTCGGCGGC
GGCCAGGGCG ACTGGGCAGC CAACGGCGTG CTCATGTCCC GGGTCGACGC GACCCACTTC
ACCGCATCCG TCAGCGCGGC CAACGCATCC ACCACGCTGC AGTACAAGTA CACGCTCAAT
GGAACCTGGT CGAACAATGA GGAGACGGGC TCCTGCGGGT ATGTGCAGAA CCGTTCCCTC
ACCGTGAACG GCGGCACTCA GACCGACACC GTCGCGAACT GGAAGGGGTA CGGCGGCTGC
TGA
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| Protein sequence | MLGRFISPPR VGRRWLRSSL SAFAGLSLAT VGVWASSSPV ARAGTASGGP GTASFWNETS
GVQGFATALS PSSKVWYTLG NGGLENVFYP QTDNPDTYGL QYYVTDGSSF TDGEATNTKH
AIALADPASL TFTQTNTAAS GKYAITKTYV ADPARSVILV KTTFTNNGST PLYLYADYLP
QLNNQGMGNI GSTDAGGDLV ASNGPMASAL AASTPFSSAS TGYVGTASSG TAQLATGHTL
GTVYSGVSSS GHIDQTAQIP VAASGSTTFT LALGFDTTSA AAVSDVSASL SSGFAAVQSS
FQAGWHTWMS GLTTAPASVA NNAGLLTQYE TSLMEVKADE DKNYVGAFVA APVTPWGSTV
SADGGGGHGY HLVWTRDEYQ MASALLAAGD KQDASDALTY LENYEETSSG QVKQNTWLNG
NAMWGGNQQD EEADPIILAY QLGRTGSADF AKIKLLASFI AANGPTTGQE RWEENGGYSP
ATIASEIAGL VCASNIATAN GDSADAAAWL AKAQSWAGSV AGWTYTTSGP YGSGSYFLRL
TPDGQPNSGA SIGLANGGGN HDDRTVVDQS FLDLVRLGVM PATASQVTNS LAVDDAQIGV
NTPEGQIDHR YDFDGYGETS SGADYTGAGT GNPWPVLTGE RGEYDVAAGN LTGAQSALTT
MAGAASDGQI SEQVWAGTNG TGGFSLGRPD NSANPLMWAM AQYVRLAMDI SAGQNLDTPT
VVCQTFNACS AAPTTKPAAP TNLTVTATHT TNVSLSWSGS SLAAGYKVYR ATGTGPAALV
ATVASTAYTD TKLTASTAYS YSVTAYNNVG ESGPSNTVTT TTKTPVPPPN APTGLTVSAA
ASTTVDLTWT AATDTSGGTV GGYNIYRATG TGTAALVAST SGTSFTDTGL TPSTGYTYSV
TATDTDGNES AASNSVTATT TANNVEVVTV TVPSYTDQTG LTVYMAGTLS ALGGGQGDWA
ANGIAFTRVD ATHWRATIHA AGPTTLSYKY TLGGAWANDE ETASCGYVGN RSMQINGGTE
ADTVANWAGP YTCGSSPPPP PGGGTGGNGG TTETIAVTVP ADTPASAQVY LAGNLSVLGG
GQGDWAANGV LMSRVDATHF TASVSAANAS TTLQYKYTLN GTWSNNEETG SCGYVQNRSL
TVNGGTQTDT VANWKGYGGC
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