Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7103 |
Symbol | |
ID | 8338470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8262985 |
End bp | 8263902 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644960184 |
Product | ABC transporter related |
Protein accession | YP_003117774 |
Protein GI | 256396210 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.798057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.375982 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGC TGACCGACCT CACCAAGCGC TACGGCGACA AGACGGCCGT GGACCACCTG ACCGTGACCG TCCGATCCGG GACGGTGACC GGCTTCCTGG GCCCGAACGG CTCGGGCAAG TCCACCACGC TGCGCATGAT CCTCGGTCTG AACGCGCCGA CCTCCGGCAC GGTCACCATC GACGGCAGGC GCTTCATCGA CCGGCCGCGC GGGCTGCGCC ACGTCGGCGC GCTGCTGGAC GCACAGGACA TCCACGGCGG GCGTTCGGCC GTGGCGCACC TGAAATCGCT GGCCGTCAGC AACCGGATCC CGCTGCGCCG GGTCGGCGAG GTGCTGGACG AGGTCGGGCT CGCCGAGGCC GGCCGCAAAC GGATCGGCGG CTACTCCCTG GGCATGAAGC AGCGCCTGGG CATCGCCGGC GCGCTGCTCG GCGACCCGCC GGTGCTGCTG TTCGACGAGC CGTTGAACGG TCTGGACCCC GAAGGTGTGC GCTGGGTGCG CGAGATGTTC CAGCGGCTGG CCAAGGAGGG GCGGACGGTG TTCGTCTCCA GCCACCTGAT GTCCGAGATG GAGCACACCG CCGAGCGGCT GGTGGTGATC GGGCGCGGCG CGCTGATCGC CGACGAGACC CTGGCCGACT TCTCGCGCCG TGGTTCGAAG GCCGCCGTCC TGGTGCGGGC GCCGGAGGCG GCCGCGCTGG CGGCGATCCT GACCGCCGAG GGCGCCGAGG TCGAAGACGC CGCCACCGCG GCCGGCGGGC TGACCGTCCT GGGCCTGACC GCCGCCCGGA TCGGCGAGCT GGCCTGGCGC AACGACATCA TGCTGGCCGA GCTCGCCACG CAGAACGCCT CGCTGGAGAA GGCGTTCATG GAACTGACCG CCGACGCCGT CGAATACGCC GCAGGAGAAG CCCGATGA
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Protein sequence | MIELTDLTKR YGDKTAVDHL TVTVRSGTVT GFLGPNGSGK STTLRMILGL NAPTSGTVTI DGRRFIDRPR GLRHVGALLD AQDIHGGRSA VAHLKSLAVS NRIPLRRVGE VLDEVGLAEA GRKRIGGYSL GMKQRLGIAG ALLGDPPVLL FDEPLNGLDP EGVRWVREMF QRLAKEGRTV FVSSHLMSEM EHTAERLVVI GRGALIADET LADFSRRGSK AAVLVRAPEA AALAAILTAE GAEVEDAATA AGGLTVLGLT AARIGELAWR NDIMLAELAT QNASLEKAFM ELTADAVEYA AGEAR
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