Gene Caci_7103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7103 
Symbol 
ID8338470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8262985 
End bp8263902 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content72% 
IMG OID644960184 
ProductABC transporter related 
Protein accessionYP_003117774 
Protein GI256396210 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.798057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.375982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGC TGACCGACCT CACCAAGCGC TACGGCGACA AGACGGCCGT GGACCACCTG 
ACCGTGACCG TCCGATCCGG GACGGTGACC GGCTTCCTGG GCCCGAACGG CTCGGGCAAG
TCCACCACGC TGCGCATGAT CCTCGGTCTG AACGCGCCGA CCTCCGGCAC GGTCACCATC
GACGGCAGGC GCTTCATCGA CCGGCCGCGC GGGCTGCGCC ACGTCGGCGC GCTGCTGGAC
GCACAGGACA TCCACGGCGG GCGTTCGGCC GTGGCGCACC TGAAATCGCT GGCCGTCAGC
AACCGGATCC CGCTGCGCCG GGTCGGCGAG GTGCTGGACG AGGTCGGGCT CGCCGAGGCC
GGCCGCAAAC GGATCGGCGG CTACTCCCTG GGCATGAAGC AGCGCCTGGG CATCGCCGGC
GCGCTGCTCG GCGACCCGCC GGTGCTGCTG TTCGACGAGC CGTTGAACGG TCTGGACCCC
GAAGGTGTGC GCTGGGTGCG CGAGATGTTC CAGCGGCTGG CCAAGGAGGG GCGGACGGTG
TTCGTCTCCA GCCACCTGAT GTCCGAGATG GAGCACACCG CCGAGCGGCT GGTGGTGATC
GGGCGCGGCG CGCTGATCGC CGACGAGACC CTGGCCGACT TCTCGCGCCG TGGTTCGAAG
GCCGCCGTCC TGGTGCGGGC GCCGGAGGCG GCCGCGCTGG CGGCGATCCT GACCGCCGAG
GGCGCCGAGG TCGAAGACGC CGCCACCGCG GCCGGCGGGC TGACCGTCCT GGGCCTGACC
GCCGCCCGGA TCGGCGAGCT GGCCTGGCGC AACGACATCA TGCTGGCCGA GCTCGCCACG
CAGAACGCCT CGCTGGAGAA GGCGTTCATG GAACTGACCG CCGACGCCGT CGAATACGCC
GCAGGAGAAG CCCGATGA
 
Protein sequence
MIELTDLTKR YGDKTAVDHL TVTVRSGTVT GFLGPNGSGK STTLRMILGL NAPTSGTVTI 
DGRRFIDRPR GLRHVGALLD AQDIHGGRSA VAHLKSLAVS NRIPLRRVGE VLDEVGLAEA
GRKRIGGYSL GMKQRLGIAG ALLGDPPVLL FDEPLNGLDP EGVRWVREMF QRLAKEGRTV
FVSSHLMSEM EHTAERLVVI GRGALIADET LADFSRRGSK AAVLVRAPEA AALAAILTAE
GAEVEDAATA AGGLTVLGLT AARIGELAWR NDIMLAELAT QNASLEKAFM ELTADAVEYA
AGEAR