| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7095 |
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| Symbol | |
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| ID | 8338462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8254921 |
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| End bp | 8256648 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644960176 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_003117766 |
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| Protein GI | 256396202 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.680136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.108569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGCG CAGAACGCCC CGAGCCGGCC GCCGACGGAC CGGCCACGGC CGCGACCGGG
GCGTCCCCGA CCCCGTCGAT GTACGTCACC CAGTACCCGA CCGTCGCCGA CGTCCTCCAG
CTCGGCCCGG TGAAGCAGGG CGGTCCGCGG GTGGTGGCCG GCGCCGCCGG GCTGGACCGC
GTGGTGCGCT GGGTGCACGT CACCGAACTG GTCGACGTCG GCACCATCCT GCGCGGCGGC
GAGCTGGTCC TGTCCACCGG CATCGCCTGG CCCGAGGACC GCGACCGGCT CGCGGACTTC
GTCGCCGACC TGGCCAAGCT CGGCGCCGCC GGCCTGGTCC TGGAGCTGGG CCGGCGCTAC
ACCGACAGCA GCCTGCCCAA GGCGCTGCTG GCCGCCGCCG AGAAGCACAG CCTGCCGGTG
ATCACCCTGG CGCTCGACAC ACGTTTCGTC ACGATTACCG AAGCCGTGCA CGGTCTGATC
ATCGACGCCC AACTCGCCGA GCTGCGCGCC TCCGACGAGG TCCACCAGAC CTTCACCGAA
CTCGCGGTCG AGGGCGCCTC CCCGGATGAG GTGGTCCAGC AGATCGGCCG CATGTCCGGC
TGCCCGGTGG TGCTGGAGAA CCTGGCGCAC CAGGTCCTCA CCTACTCTCA GGCCGGCGCC
GATCCGGCGG TCCTGCTCGA CGGCTGGGAG GGCCGCTCCC GCTCGGTGCG CCCGACCACC
GGACGCACCG TGTACGACGA GCGCTCCGGC TGGCTGACCA CGGTGGTCGG CGCGCGCGGG
CACGACTGGG GACGCCTGGT CCTGATCTGC AACGACCCGG CGCCGGTCCC GCGCCTGTCC
ATGTTGTTGG AGCGCGCCGC CGCGACCCTG GCGCTGAACC GGCTGGTCGA GCGGGACCGC
GATTCGCTGG AGCGGCAGAC GCACCGGACC TTGCTGACCG CGATCCTGTC CCACGGCCAG
CCGGCGTCGG AGGTCGCGCT GCGGGCGCGC GCGCTCGGCG TGACGCTCGA CGGCCGCCGG
CTGGTCGGCG TCGTGCTGCG GCTGCGCACC GCCGCGCACC CGACGGCGCT GGAGACGCAG
GCGCGGCTGC GCGAGCTGAC CGACCAGGCC GCCGCGGCGA TCCGCGACCG CCGGCTCTCG
GCGCTGATCG GCACGCTGGA CGAGCACAGC GTCGGCCTCC TGCTCGCGCT CGGACCGCAG
GACCGCGAGG ACGCCGCCCT GGACGGCTTC GCCGAGCGGG TCCGCCGGCT CGTGGAGCGT
CCGACGTCGC CGTCGTCGGC CGACGGCTAC GTCATCGCCG TCGGCACCTC GGTCGGCGCG
GTACGCGACG CGCGCCGGTC GCTGCTGGAA GCGGTGCAGG TCGCGGACGC GGCGGTGCGG
CAGCCCGCGG TGCAGGCGCC GTACCACCGG CTGGTGGACG TCCGCCTGCG CGGACTGCTG
CATCTGCTGC GCGACGACGC GCGCCTGCAG ACCTTCGTGG AACGCGAGCT CGGCCCGCTG
CTGGCCTACG ACGCCGAGCG CGGCACGGAC TTGGTCAGGA TGCTGACGGT GTATGTGGAT
TCGGGACGCA ACAAGTCGGC GGCGGCCGAC GCCGCGCACC TGTCCCGGCC GTCGTTCTAC
GAGCGGCTGC ACCGGATCGA GCGGATCCTG TCGGTGGACC TGGACTCGGT GGAGTCGTGT
CTGGCGTTGC ACGTGGCGCT GCTGGCCCTG GAAGCTATCA GACCATGA
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| Protein sequence | MSSAERPEPA ADGPATAATG ASPTPSMYVT QYPTVADVLQ LGPVKQGGPR VVAGAAGLDR
VVRWVHVTEL VDVGTILRGG ELVLSTGIAW PEDRDRLADF VADLAKLGAA GLVLELGRRY
TDSSLPKALL AAAEKHSLPV ITLALDTRFV TITEAVHGLI IDAQLAELRA SDEVHQTFTE
LAVEGASPDE VVQQIGRMSG CPVVLENLAH QVLTYSQAGA DPAVLLDGWE GRSRSVRPTT
GRTVYDERSG WLTTVVGARG HDWGRLVLIC NDPAPVPRLS MLLERAAATL ALNRLVERDR
DSLERQTHRT LLTAILSHGQ PASEVALRAR ALGVTLDGRR LVGVVLRLRT AAHPTALETQ
ARLRELTDQA AAAIRDRRLS ALIGTLDEHS VGLLLALGPQ DREDAALDGF AERVRRLVER
PTSPSSADGY VIAVGTSVGA VRDARRSLLE AVQVADAAVR QPAVQAPYHR LVDVRLRGLL
HLLRDDARLQ TFVERELGPL LAYDAERGTD LVRMLTVYVD SGRNKSAAAD AAHLSRPSFY
ERLHRIERIL SVDLDSVESC LALHVALLAL EAIRP
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