| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7041 |
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| Symbol | |
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| ID | 8338407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8182894 |
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| End bp | 8184651 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644960121 |
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| Product | 2-isopropylmalate synthase |
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| Protein accession | YP_003117712 |
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| Protein GI | 256396148 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00970] 2-isopropylmalate synthase, yeast type |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAGTAC AGCCGCAACT GCCCTCCGGC ATGCCGATCC ACAAGTACGT CCCGTTCGCG
CCGATCGCGC TGGCCGACCG CACCTGGCCC ACGAAGGTCG TCGACCGGGC TCCGCGCTGG
TGCGCGGTGG ACCTGCGCGA CGGCAACCAG GCGCTGATCG ACCCGATGTC CCCGGCCCGC
AAGCTGAAGA TGTTCGAGCT GCTGGTGGCC ATGGGCTACA AGGAGATCGA GGTCGGGTTC
CCGGCCGCGT CGCAGACCGA CTTCGACTTC GTCCGGCAGA TCATCGACGA GGGCCGGATC
CCCGACGACG TGGTGATCCA GGTCCTGACC CAGGCCCGCG AGGAGCTGAT CGAGCGGACC
TTCGAGTCCG TGCGCGGCGC CAAGCAGGCC ATCGTGCACC TGTACAACTC CACCTCCACG
CTCCAGCGCC GGGTGGTCTT CGGCCAGGAC ACCGCCGGGA TCACGCAGAT CGCGGTGAAC
GGCGCCAAGC TGTGCCAGAA GTTCTACGAG GCGATGCCCC CGCGCGCCGA CGGCACCCGC
ACGGACATCT ACTTCGAGTA CTCGCCGGAG TCCTACACGG GCACCGAGCT GGAGTACGCC
GTCGAGGTCT GCGACGCCGT CACCGAGGTC TGGCAGCCCA CCCCGGACCG CAAGGTGATC
ATCAACCTGC CGGCCACCGT GGAGATGGCC ACGCCGAACG TCTACGCCGA CTCGATCGAG
TGGATGCACC GCAACCTGGA GCGCCGCGAC TCCATCGTGC TCTCGCTGCA CCCGCACAAC
GACCGCGGCA CCGCCGTGGC CGCCGCCGAG CTGGGCTACC AGGCCGGCGC CGACCGCATC
GAGGGCTGCC TGTTCGGCAA CGGCGAGCGC ACCGGCAACG TGTGCCTGGT GACCCTGGGC
CTGAACCTGT TCTCCCAGGG CGTGGACCCG CAGATCGACT TCTCCGACAT CGACGAGGTG
CGGCGCACCG TCGAGTACTG CAACCAGCTG CCGGTCCACC CGCGCCACCC CTACGGCGGC
GACCTGGTGT ACACCGCCTT CTCCGGGTCC CACCAGGACG CGATCAAGAA GGGCTTCGAG
CACCTGGAGC GGGACGCCGC GGCGGCCGGA AAGACCGTCG ACGAGATCGT CTGGGCCGTG
CCGTACCTGC CGATCGACCC CAAGGACGTG GGCCGCAGCT ACGAGGCCGT GATCCGGGTC
AACTCCCAGT CCGGCAAGGG CGGCGTCGCC TACATCCTGA AGACCGAGCA CCAGCTGGAC
CTGCCGCGGC GCGCGCAGAT CGAGTTCTCC CAGGTCATCC AGGCCAAGAC CGACGCCGAG
GGCGGCGAGG TCACCCCCGA GGAGATCTGG AACGTCTTCG TCGACGAGTA CCTGCCGCTG
AGTGAATATG GGGCTCCGCC CCGGGCAGCG GCGCCCTGGG GACGCATCCG GCTGCTGGGC
CACCACGCCT CCTCGGCGAT CGAGGAGAAG GACCAGCTGA CCGTCGACCT GCAGGTGGAC
GGGAGCACCA CACAGCTGGA CGGCGTCGGC AACGGCCCGA TCGACGCGTT CACCAACCTG
CTGTCGGGGG TCGGGATCGA CGTGCGGGTG CTGGACTACG TCGAGCACGC GCTGACCTCC
GGCGAGGACG CCAAGGCCGC GTCGTACGTG GAATGCGCGA TCGGCAGCCG GGTGCTGTGG
GGCGTGGGGA TCGATGCCAA CATCGTGACG GCATCGCTCA AGGCCATCAT CTCCGCGGTG
AACCGGGCGT TCCGCTGA
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| Protein sequence | MRVQPQLPSG MPIHKYVPFA PIALADRTWP TKVVDRAPRW CAVDLRDGNQ ALIDPMSPAR
KLKMFELLVA MGYKEIEVGF PAASQTDFDF VRQIIDEGRI PDDVVIQVLT QAREELIERT
FESVRGAKQA IVHLYNSTST LQRRVVFGQD TAGITQIAVN GAKLCQKFYE AMPPRADGTR
TDIYFEYSPE SYTGTELEYA VEVCDAVTEV WQPTPDRKVI INLPATVEMA TPNVYADSIE
WMHRNLERRD SIVLSLHPHN DRGTAVAAAE LGYQAGADRI EGCLFGNGER TGNVCLVTLG
LNLFSQGVDP QIDFSDIDEV RRTVEYCNQL PVHPRHPYGG DLVYTAFSGS HQDAIKKGFE
HLERDAAAAG KTVDEIVWAV PYLPIDPKDV GRSYEAVIRV NSQSGKGGVA YILKTEHQLD
LPRRAQIEFS QVIQAKTDAE GGEVTPEEIW NVFVDEYLPL SEYGAPPRAA APWGRIRLLG
HHASSAIEEK DQLTVDLQVD GSTTQLDGVG NGPIDAFTNL LSGVGIDVRV LDYVEHALTS
GEDAKAASYV ECAIGSRVLW GVGIDANIVT ASLKAIISAV NRAFR
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