Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7011 |
Symbol | |
ID | 8338377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8149624 |
End bp | 8150772 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644960091 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003117682 |
Protein GI | 256396118 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00655237 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGTCG CCGATCTCGA GCGCTCCGCG CTCGGGACGC CCGACCGCGG CTCGGCGCGG GCGTTCGTGG ACAGATGGAT CGTGCCGTGC GCCAACGAGT GGGACCGCGA CGGCCGCATC CCGGAGGAAC TGCTGGAACG CCTTGCCGCA GAAGGCTTGT GGGCGCCGTT CCTACCTCCG GAGTTCGGAG GCGCCGGCCT GGACATGGTC ACGCTCGGCG CGATCCACGA GGAGGTCGGC CGCGGCTGCT CCTCCGTGCG CAGCCTGCTG ACGGTGCACA CCATGGCCTC CTGGGCCGTG CACCGCTGGG GCAGCCCGGA ACAGCGCGAG CGCTGGCTGC CGGCGATGAG CCGCGGCGCG GTGCTCGGCG CGTTCTGCCT GTCCGAGCCC GGCGCCGGCA GCGACACCGC CGGCATCGCC ACCACCGCGG TCCCGCACGC CGGCGGCTGG CGGCTGAACG GCATGAAGCG CTGGATCACC AACGGGCAGC GGGCCGACCT GCTGCTGGTG TTCGCGCGCG TCGGCACCGG CATCGCGGCG TTCCTGGTGC CGCACGACAC CCCCGGCGTC AGCATGCTGC CGATCGACGG CATGCTCGGC ACCCGCGCCT CGATGCTCGC CGAGATCTCC TTCCAGGACG TCGACCTGGG CCCGGACGCC CTGCTCGGGC CCAGCGGCTT CACCGCCGGC ATGGTGCTCA CCGGCACCCT GGACCTGGGC CGCTACAGCG TGGCGACCGG CTCGGTGGGC ATCATCCAGG CCTGCGTCGA CGCCTGCGCC GGGTACTCCG CCGCGCGCAA GGTCGGCGGC GCCCCGCTCT CCGAACTGCC GCAGATCCGC GCCAAGCTCT CCGACATGGT CACCGACGCC CGCGCGGCGC GGCTGCTGTG CGAGGAGGCC GGACGGCTGA AGGACGCCGG GGAGCCCTCG ACCATCATGG CGACCTGGAT CGCGAAGTAC TTCGCCTCGA CCGCCGCGGC CCGCCACGCC GCGGAGGCCG TGCAGGTCCA CGGCGCCAAC GGATGCAGCC CCGACTACCC GGTCGAGCGC TTCTACCGCG ACGCCAAGAT CATGGAGATC ATCGAGGGCT CCACCGAGGT CCAGCAGCTG ACCATCGCCG GCGAGGCCTT CCGGGGAGGG GTGTCGTGA
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Protein sequence | MTVADLERSA LGTPDRGSAR AFVDRWIVPC ANEWDRDGRI PEELLERLAA EGLWAPFLPP EFGGAGLDMV TLGAIHEEVG RGCSSVRSLL TVHTMASWAV HRWGSPEQRE RWLPAMSRGA VLGAFCLSEP GAGSDTAGIA TTAVPHAGGW RLNGMKRWIT NGQRADLLLV FARVGTGIAA FLVPHDTPGV SMLPIDGMLG TRASMLAEIS FQDVDLGPDA LLGPSGFTAG MVLTGTLDLG RYSVATGSVG IIQACVDACA GYSAARKVGG APLSELPQIR AKLSDMVTDA RAARLLCEEA GRLKDAGEPS TIMATWIAKY FASTAAARHA AEAVQVHGAN GCSPDYPVER FYRDAKIMEI IEGSTEVQQL TIAGEAFRGG VS
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