| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6999 |
|---|
| Symbol | |
|---|
| ID | 8338365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8101957 |
|---|
| End bp | 8103786 |
|---|
| Gene Length | 1830 bp |
|---|
| Protein Length | 609 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644960079 |
|---|
| Product | asparagine synthase (glutamine-hydrolyzing) |
|---|
| Protein accession | YP_003117670 |
|---|
| Protein GI | 256396106 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
|---|
| TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.655968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAA TCACCGGGTG GGTCAGCTAC GAGCGCGACC TGTCCACCCA GCGCCCGACC
GTCGAGGCGA TGACCGACAC GATGATCTGC CGCGGTCCCG ACGAGGGCGG CGTGTTCATC
GACGGGCCCG TCGCCCTGGG CCACCGCCGG CTGGCGGTCA TCGACATCGA GGGCGGCAAG
CAGCCGATGG CCGCCGAGGG TCTGGCGCCG GTCGCGCTGA CCTACAGCGG CGAGGTCTAC
AACTTCCAGG AGCTGCGCGC CGAGCTGGAG GGCAAGGGCC ACACCTTCCG CACCGCCAGC
GACACCGAGG TCGTGCTGCA CGCCTACCTG GAGTGGGGCA GCGCCTTCGT CGACCGGCTC
ACCGGCATGT ACGCCTTCGC CGTCTGGGAC GGCCGCACCC GCGAGCTGCT GCTGGTCCGC
GACCGCATGG GCATCAAGCC GCTGTACTAC CAGGCGATGC CCGACGGTGT GCTGTTCGGC
TCCGAGCCCA AGGCCATCAT GGCCTCCGGG CTGGTCGACC CGGCCGTGGA CCTGGACGGC
CTGCGCGAGA TCTTCGCCTC GGTGAAGACC CCGGGCACCG CCTACTTCCG CGGGATGAAG
GAGGTGCGTC CGGGCACGTT CGTGCGCGTG CGCCCCGAGG GCGTCACCGA GCACCGCTAC
TGGGCTCTGG AGGCGACCGA GCACACCGAC GACCTGCCGA CCACCATCGC GACCGTCCGC
GAGCTGCTGG ACGACATCAT CGCCCACCAG GTGGTCTCCG ACGTGCCGCT GTGCTCGCTG
CTGTCCGGCG GGCTGGACTC CAGCGCCATC ACGGCCCTGA CCCAGCGCGC CCTGACCGCG
CGCGGACAGG GCCCGGTCCG CTCCTTCTGC GTGGACTTCG AGGGCCTGAC CGAGAACTTC
GTCGCCGACC ACCTGCGCGC CGAGGCGGAC ACCCCCTACG TCCACGCTCT GGCCGAGTTC
GCCGGCACCG AGCACCGCGA CATCGTCCTG CGCACCGACG ACCTGATGGA CCCCGCCAAC
CGCACCGCGG CGCTGCTGGC GCGCGACGCC CCGCCGCAGG GCGACATCGA CATCTCGATG
TTCCTGCTGT TCAAGGCGAT CCGCGAGCAC TCCACCGTCG CGCTGTCCGG CGAGGCCGCC
GACGAGGTCT TCGGCGGCTA CAGCTGGTTC CACGACGAGG CGGCGGTGAA GGCCGACACC
TTCCCCTGGC TGGCGGGCCT GGGCAATCTG GACGGCGCGG ACTTCCTCGA GCCGGACCTG
GCGACCAAGC TGGACTTGGC GACCTACCGC GCCGACCGGT ACTCCGACGC CATGGCTGAG
ATGCCGCGCC TGGCCGGCGA GGACGGCCTG GAGAAGCGCA TGCGCGAGAT CAGCTACCTG
CACCTGACCC GCTTCGTCAA CATCCTGCTG GACCGCAAGG ACCGCCTGAG CATGGCCAGC
GGCCTGGAGG TCCGCGTCCC CTTCTGCGAC CACCGCCTGG TCCAGTACGT GTTCAACGCC
CCCTGGGCGA TGAAGACCTT CGACGGCCGC GAGAAGAGCT TGCTGCGCGC CGCAGTCGCG
GACCTCCTGC CGGAGAAGGT CCTCCAGCGT GTGAAGAGCC CCTACCCGAC CACCCAGGAC
CCGAACTACT ACCTCGCGCT CCAGAAGGCG GCGCAGGAGA TGATCGCCAA CGACCCCGAA
GCGCCGATCA TGTCGATCAT CAACCCGATG ATCCTGCAAG CGATCCTGCA CGCCCCCGCC
GACGCCGACC CCCGGCTGCG CGACGGCTTG GAGAGCGCCC TTGGCGGCAA CGAGTGGGCG
CAGCGGTACA AGGTCACGCT GGACGTGTGA
|
|---|
| Protein sequence | MCGITGWVSY ERDLSTQRPT VEAMTDTMIC RGPDEGGVFI DGPVALGHRR LAVIDIEGGK
QPMAAEGLAP VALTYSGEVY NFQELRAELE GKGHTFRTAS DTEVVLHAYL EWGSAFVDRL
TGMYAFAVWD GRTRELLLVR DRMGIKPLYY QAMPDGVLFG SEPKAIMASG LVDPAVDLDG
LREIFASVKT PGTAYFRGMK EVRPGTFVRV RPEGVTEHRY WALEATEHTD DLPTTIATVR
ELLDDIIAHQ VVSDVPLCSL LSGGLDSSAI TALTQRALTA RGQGPVRSFC VDFEGLTENF
VADHLRAEAD TPYVHALAEF AGTEHRDIVL RTDDLMDPAN RTAALLARDA PPQGDIDISM
FLLFKAIREH STVALSGEAA DEVFGGYSWF HDEAAVKADT FPWLAGLGNL DGADFLEPDL
ATKLDLATYR ADRYSDAMAE MPRLAGEDGL EKRMREISYL HLTRFVNILL DRKDRLSMAS
GLEVRVPFCD HRLVQYVFNA PWAMKTFDGR EKSLLRAAVA DLLPEKVLQR VKSPYPTTQD
PNYYLALQKA AQEMIANDPE APIMSIINPM ILQAILHAPA DADPRLRDGL ESALGGNEWA
QRYKVTLDV
|
|---|
| |