| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6888 |
|---|
| Symbol | |
|---|
| ID | 8338254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7959608 |
|---|
| End bp | 7960033 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644959976 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003117567 |
|---|
| Protein GI | 256396003 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0908877 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.53378 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGT TCGTCACGCT GCTCGTCGGG GTGCTGATGA TGGTGATCGG TCTGGTGACC
GATGGCGGGG GAGCGGTGGC TGCTCGGGCC GACGCTCTGG ACGAGGCCAT GTCCGCCGGC
CGAGCGGCTT CGCAAGCCAT TGATATCGAG GCGCTACATC GGGACCACGT GATTGTGCTG
GACGAGCCTG CAGCTAGAAG CGCCGCCGCT GACTTCATGG CGGCCACAGG CGACCATGCC
GTGATCAGCA TCAGGCAGGT CGGGGCGGCC AACCGCGTTA CTCACGTGGG TGGTGACGCT
GGGCCTGAAG TGACGGTGAC CGTCACCCGC ACCGTGAAGA CCCAGTTCCT GTGGGCCGTG
GGGATCGACT CCTTCGCCAT GACCGCTACG GCGACCGTGA CTCCCGAGCC TGGGAGCCTC
CAGTGA
|
|---|
| Protein sequence | MTVFVTLLVG VLMMVIGLVT DGGGAVAARA DALDEAMSAG RAASQAIDIE ALHRDHVIVL
DEPAARSAAA DFMAATGDHA VISIRQVGAA NRVTHVGGDA GPEVTVTVTR TVKTQFLWAV
GIDSFAMTAT ATVTPEPGSL Q
|
|---|
| |