Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6842 |
Symbol | |
ID | 8338208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7898849 |
End bp | 7899076 |
Gene Length | 228 bp |
Protein Length | 75 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644959933 |
Product | phage transcriptional regulator, AlpA |
Protein accession | YP_003117524 |
Protein GI | 256395960 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.19362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCCC GGCACGTCCC GATCCGCAGC ATCCGAAGCT CAGCTGACGA CTCCCTGCTG AGCATCCCCC AGGTCATCAC GGAGCTCGGG ATCAGCCGGG CGACCTTCTA CCGCTGGCGG TCCCTGCGCA AAGGGCCGGC GAGCCTTCGC CTGCCCAACG GCTCTATCCG CATCCGCCGC TCCGATCTTG ACGCGTTCCT TACCGCATGC GAAGAACCGC GCCACTGA
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Protein sequence | MPPRHVPIRS IRSSADDSLL SIPQVITELG ISRATFYRWR SLRKGPASLR LPNGSIRIRR SDLDAFLTAC EEPRH
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