Gene Caci_6779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6779 
Symbol 
ID8338143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7825786 
End bp7826184 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content70% 
IMG OID644959869 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003117462 
Protein GI256395898 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.636824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGG CAAGGCTGGA AATGCCGGCG ACCTGTCAGG AGGTGGGCCC GGAGGGGCAG 
TTCGTCCGCG GCGTGCTCGA CCGCATCGGC GACAAGTGGA GCCTGATGAT CATCGGCAGC
CTGAACCGCG GCCCACGCCG CTTCGGCGCC CTCCAGGCGG CGATCGGCGG CATCTCGCAG
CGGATGCTGA CGCTGAACCT GCGCCAGTTG GAGCGCGACG GGCTGATCTC GCGCACGGTC
TACGCCGAGG TGCCGCCGCG GGTTGAGTAC GAGCTCACGG AGCTGGGGCA CGGGTTGCTG
GTGCCGGTGC TGGAGCTGGT GAACTGGGCC GGGGACCACG CCGAGGTGAT CGAGAAGCAT
CGGGCGGCTT ATGACGCGGG GGGTGGGGCG GTGGGGTGA
 
Protein sequence
MAEARLEMPA TCQEVGPEGQ FVRGVLDRIG DKWSLMIIGS LNRGPRRFGA LQAAIGGISQ 
RMLTLNLRQL ERDGLISRTV YAEVPPRVEY ELTELGHGLL VPVLELVNWA GDHAEVIEKH
RAAYDAGGGA VG