Gene Caci_6740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6740 
Symbol 
ID8338104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7775034 
End bp7776254 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content71% 
IMG OID644959833 
Producthypothetical protein 
Protein accessionYP_003117426 
Protein GI256395862 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.466169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGA ACGAACCGAC GCCCCACCAC ACCCGCCCGG CCGCCACCGC CGCGACGGCG 
AACACCCGCG AACTCCCTCC CGTCGACCTC GACGCCGCCG CCACGCCCCC GCGCAGGGGC
ATCGCGGAGG CGGACACGGT TGCTTTCACG GCGGTGGATG CGGGAGCGGT GGATGCGGGA
GCTACGGGTG CGGGTGCGGG TAACGGTGCT GGCACGAGTG CGAGCAATGG CGCTGCGACG
AGCACGAACG ACGATGATGC TTCGAGCGAT GACGCCGACG CTGATGCGGG CGATGGTGGT
GAGGCGAGTG CGAGCGACGG CGCGGATTCG GACGACACCG CCGAGCTGAC CGCCGAGTCG
GTGCCGCGCT CGAATGCGGA GGCTCCCACA GTCGGGATGG AGCGGGTCGT CCTGCCCCCC
AATGGGACCG AGACGGTCGC CCTGGATGTG GAGGCCGTGA AGCGCGCCGT CGCCGAAGGA
CTCGCCGCCT CGGATGCGAC AGCCACAGTT TCGCTCGATC TGGCGGAGGT CAAGCGGGCC
ATAGCTGAGG AGTCTGCCGA TACTCAGCCG GCTGACATCG AGCCCGCCGA CATCGACCCT
GCTGACCCCG AGCCAGCCGA CATCGATCCT GCCAACCCCG AGCTGACCGA TACCGAGCCT
GTCGACCCCG ACCCGGCCGG TACCGACCCT GTCGATGACT CGCCGGTCGA GTCTGAATCC
GCCGCCTCCG CCACCTCCAC CGACCTCGTG CCGGCCGCCG AAAGCAGCGT CGACACCCCC
ACCGCGCCCT ACCTCGTCGC CACCGACCTC TCCGCCTCCG CCGCCTCCGC CTCGACCCTC
GTCGCGGTCC CCGAGACCGC CGACGACGTC ATCGCCACCA TCCACGCCGC TGCGACCGCC
GTCGCGGCGG CTGATCGGCG TGCGCGGCAG GCGGCGGTGG CGAAGGAGGA TCCGTGGACC
GGGCTGGATC TGCACCAGCC TCCGACGCCA GCGCCGGTCG ACAACGTGCT GGATCTGCTG
GCGCCGGTGT TGGAGCGGCC GTTGCTGGTG GTGGAGCAGC CCGGATTGCC CGCTGCCGCC
GACGTCGTGG CATTGCACCG GTCCGAGCTG GAGGTGGACT TCGTCGAGCC GCCGGTGGTG
GCCGCCGGCG CCGAGCCGCC GATACCGCCG CGCTACGGTC CGGGCCTGTC CGTGCTGCCG
CACATCGAGT TCCCGGTCTA G
 
Protein sequence
MLLNEPTPHH TRPAATAATA NTRELPPVDL DAAATPPRRG IAEADTVAFT AVDAGAVDAG 
ATGAGAGNGA GTSASNGAAT STNDDDASSD DADADAGDGG EASASDGADS DDTAELTAES
VPRSNAEAPT VGMERVVLPP NGTETVALDV EAVKRAVAEG LAASDATATV SLDLAEVKRA
IAEESADTQP ADIEPADIDP ADPEPADIDP ANPELTDTEP VDPDPAGTDP VDDSPVESES
AASATSTDLV PAAESSVDTP TAPYLVATDL SASAASASTL VAVPETADDV IATIHAAATA
VAAADRRARQ AAVAKEDPWT GLDLHQPPTP APVDNVLDLL APVLERPLLV VEQPGLPAAA
DVVALHRSEL EVDFVEPPVV AAGAEPPIPP RYGPGLSVLP HIEFPV