Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6733 |
Symbol | |
ID | 8338097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7766109 |
End bp | 7767173 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644959827 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_003117420 |
Protein GI | 256395856 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.564836 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAGC CCGAACAGTC GCCGGCCCGC CCGACGATCA AGGCGGTCGC CAAACACGCG CAGGTGTCCT ACCAAACCGT GTCGAACGCG CTGAACGCCC CGGAGCGCCT GCGTCCGGAC ACCCTGGCGC GCGTGCTGCG CGCGGTGGAG GACCTCGGCT ACCGGCCCAC GCAGGCCGCG CGCAACCTGC GGTTGCAGAC CACGCGGCTG ATCGGGTTCC GGTCCACGCG CTCCGGCGGG CGCGATATCG GCGCCATCGA GGACCGGTTC CTGTACGCGC TGACCTCCGC CGCGCGCGAT CGCGGGTACG GCGTGATCCT GTTCGCCGCC GACGGCGACG AGGACGAGAT CGCCATGTTC GAGGACCTGG TCAGCCGGGG CGCGGTGGAC GGCTTCGTGT TGTTCGGCTC GCACCGGCAC GACGCGCGCA CCGCCTGGCT CGCCGAGCGG GACGTGCCGT TCGTCAGCTT CGGCCGGCCG TGGGAGAAGA CCGCGTTCGA GTACTCCTGG CTCGACGTCG ACGGGCACGC CGGCACGCTG GCCGCGACCC GGCATCTGGC CGCCGCCGGC CACCGCCGCG TCGCCTTCCT CGGCTGGCCC GAGGGCAGCG AGGTCGGCGA CGACCGGTAC GCCGGCTATC TCGCCGCCGC CGAAGAACTC GGCCTGCCCA CCCGCGGGCT GACCGTGCGC GGGCTGAACG GCATCGGCGA CGGCACGAAG CTCGCGGCCG CGCTGCTGGA CAAGGCGCAT CCGCCGACCG CGTTCGTCTG CGTCAGCGAC GCGATGGCCG TCGGCGTGAT GCACGCGGTG GAGCACCGCG GGCTGGCCGT GGGCCGCGAC GTCGCGGTGA TCGGCTTCGA CGACAGCCCG CTGGCCACCG TCGTCCAGCC CGCCCTGAGC AGTGTGCGCC AGCCGCTGGA GTCCATCGCG CGCCAGTGCG TGGACCTGGT GCTGGAGCGC ATCGACGACC CCCGCAGCGC GGTGACCACC TCCGTCGTGG AGCCCACGGT CATAGCGCGC GGCAGCAGTG ATCCCACTCA CCCCGCCCCC GATGACGAGG CCTGA
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Protein sequence | MSQPEQSPAR PTIKAVAKHA QVSYQTVSNA LNAPERLRPD TLARVLRAVE DLGYRPTQAA RNLRLQTTRL IGFRSTRSGG RDIGAIEDRF LYALTSAARD RGYGVILFAA DGDEDEIAMF EDLVSRGAVD GFVLFGSHRH DARTAWLAER DVPFVSFGRP WEKTAFEYSW LDVDGHAGTL AATRHLAAAG HRRVAFLGWP EGSEVGDDRY AGYLAAAEEL GLPTRGLTVR GLNGIGDGTK LAAALLDKAH PPTAFVCVSD AMAVGVMHAV EHRGLAVGRD VAVIGFDDSP LATVVQPALS SVRQPLESIA RQCVDLVLER IDDPRSAVTT SVVEPTVIAR GSSDPTHPAP DDEA
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