Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6633 |
Symbol | |
ID | 8337997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7641807 |
End bp | 7642820 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644959727 |
Product | hypothetical protein |
Protein accession | YP_003117320 |
Protein GI | 256395756 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3569] Topoisomerase IB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.13084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGTC TACGCCACAG CCGGACGCTG GATCCGGGCC TGCGCAGGAT CCGGCACGGC AGCGGCTTCC GCTACGTGGA CGCCGCGGGC GAGCCGGTCG ACGCCGACAC CAAGCAGCGG ATCAAGGAAC TGGTGATCCC GCCGGCCTGG GAGGACGTCT GGATCTGCCC CTGGCCCAAC GGCCACATCC AAGCCACTGG CGTGGACGAT GCCGGACGCC GCCAATACCT TTACCACCCC CAATGGCGGG AGCGTCGCGA CCGGCTCAAG CACGACCACG CCCTGGAGTT CGCCCGCCGC CTGCCGAAGA TCCGCGCCAT CGTCGACGAC GGCCTGGCCG GTGACGGACT GGGTCGCGAA CGCGTGCTGT GCGCGGCGGT CGCGCTGCTG GACGTCGGTG TCTTTCGCAT CGGCAATAAC CAGTACGCGC AGGCCAACGG CTCGTATGGG CTATCGACTT TGCGCCGCAA ACATGTCCGC ATCCACAAGG GCGAAGCAGA GTTCTCCTAC CTCGCCAAAG GCGGTCTGAA GCGGGCCGAG CACATCAGCG ACCCGCGCGT GGTGGCTGTC CTGCGCGGGC TGCTGCGGCG CAAAGGAGGC GGGTACCAAC TCCTCGCCTT CCACGAGGAC AGCCGGTGGC AACCCATTCG CAGCCAGCAC GTCAACGACT TCCTGCGCGA GATCTCCGGG ATGGAGATCA CCGCCAAAGA CTTCCGCACC TGGCACGCCA CCGTCTTCGC GGCAGTGGCA TTGAGCGTGT CCACTCATGC CGACAGCTCG CAGACCGCAC GCCGCCGCGC GGTCACCCGC GCCGTCGCCG AGACCGCCGC ATACCTCGGC AACACACCCG CCGTATGCCG CGCCTCCTAC ATCGACAGCC GCTTGATCGA CCGCTTCCTG CACGGCGAGA CCATCGCCAC CGCCCTGCCC GATCTCGGAC GCGACACACC ACCAGGCGTC CCGGCGATCC AGGGCGACGC CGAACACGCC GTTCTCCGGC TGCTCAGCGA CTGA
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Protein sequence | MTRLRHSRTL DPGLRRIRHG SGFRYVDAAG EPVDADTKQR IKELVIPPAW EDVWICPWPN GHIQATGVDD AGRRQYLYHP QWRERRDRLK HDHALEFARR LPKIRAIVDD GLAGDGLGRE RVLCAAVALL DVGVFRIGNN QYAQANGSYG LSTLRRKHVR IHKGEAEFSY LAKGGLKRAE HISDPRVVAV LRGLLRRKGG GYQLLAFHED SRWQPIRSQH VNDFLREISG MEITAKDFRT WHATVFAAVA LSVSTHADSS QTARRRAVTR AVAETAAYLG NTPAVCRASY IDSRLIDRFL HGETIATALP DLGRDTPPGV PAIQGDAEHA VLRLLSD
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