| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6606 |
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| Symbol | |
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| ID | 8337970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7616083 |
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| End bp | 7617741 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644959700 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003117293 |
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| Protein GI | 256395729 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG GCACAGTCGG CTCGCCGTCC CGGGCCACGG CTGGCAAGAC GGTCCTGGCC
ACGCTGGCGG CCGCGCAGTT CCTGATGGCG CTGGACTCCT CGGTCATGAA CGTCTCGATC
GCGACGGTCG CCTCCGACGT CGGTACCACG GTGACCGGCA TCCAGGGCGC GATCACCGCC
TACACGCTGG TCATGGCCAT GTTCATGCTC CCCGGCGGCA AGGTCGGGGC GATGATCGGC
CGCAAGCGGG CGTTCACGAT CGGCTGCGTG GTCTACGGCT GCGGGTCGCT GACCACGGCG
CTCGCCCCGA ACCTGACGGT CCTGCTGCTC GGCTGGTCGC TGCTGGAGGG CCTGGGCGCG
GCCCTGATCC TGCCGGCGGT CGTGGCCCTG GTGGCGCTCA ACTTCCCCAC CGAACGCCGC
CCGACCGCCT ACGGGCTCAT CGCGGCCTCC GCCGCCGTCG CCATCGGCCT GGGCCCGCTG
ATCGGCGGGA TCGCCACGAC GTACTTCTCC TGGCGCTGGG TCTTCGCCGG CGAGGTCGCC
ATCGTGGCCG TGATCCTGGC CCTGGCCCGG CACATCGCCG ACCGGCCGAG CGAAGGCCGG
CCGCGCTTCG ACGTGATCGG CGCGGTCCTG TCCGCGACCG GGCTCGGACT GTTCGTCTAC
GGCGTGCTCC GCACCTCCGA ATGGGGCTGG TTCGTCCCGA AGGCCGGGGC GCCGTCCTGG
CTGGGGATGT CGGCGTCGAT CTGGGTGATG CTGGCCGGGG TGCTGGTGGT GTGGCTGTTC
CTGCTGTGGC AAAGCCGTGT GCTGCGCCGC GGCGGGGACC CGCTGGTCGA TCCGGGCCTG
TTCGCCAACC GGCAGCTGTC CGGCGGCCTG ATCATGTTCT TCCTGCAGTT CCTGGTCCAG
ATGGGCGTGT TCTTCGTCGT GCCGCTCTAT CTGTCCGTGG CCCTGGGCCT GTCCGCGATC
AGGACGGGTG TCCACATCCT GCCGCTGTCC CTGAGCCTGC TGGCCGCCGC GTCCTTGATC
CCGAAGCTGT TCCCTCGCGC CTCCCCGCGG CTGATCGTGC GCTTGGGCGT CCTGAGCCTG
TTCGCCGGCG CCCTGTCCCT GGCCGCCGCG CTGAACGCCG ACTCCAGCGC GGCCGTGGTG
ACCATCCCCC TGCTGCTGAT CGGGCTGGGC ATGGGAGCCC TGGCCTCCCA ACTCGGCGCG
GTCACCGTCT CCGCGGTCCC GGACAGCCGC AGCGCCGAGG TCGGCGGCGT CCAGAACACG
GTCACCAACC TGGGCTCCTC CATCGGGACC GCCCTGGCCG GCTCCATCCT GATCGGCACC
CTGACGTCCT CGTTCCTGTC CAGCATCGAG AAGAACCCCG CGGTTCCGGC GAGTGTGAGC
GCCCAGGCCT CGACCAAGCT GGCCGCCGGT GCGCCCTTCC TGTCCGACTC CCAACTCTCC
GCCGCGCTCA CCAAGGCGAA CGTTCCTCCC GAGCAGGCGC AGGCCGCCAT GCAGGCCAAC
TCGGCGGCCC GCCTGGTCGC GGTGCGGGCC GCGGTGGCGA TCCTGGCTCT GGTGGCGTTG
ATCGCCATGG TCTTCACCGG CCGGATCCCG AACCGGCAGC CGGGGGCGCC GGGGGCGGAC
TCCGCCCGGT CGAACAAGAG CACGAAGAAT GTCACCTGA
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| Protein sequence | MATGTVGSPS RATAGKTVLA TLAAAQFLMA LDSSVMNVSI ATVASDVGTT VTGIQGAITA
YTLVMAMFML PGGKVGAMIG RKRAFTIGCV VYGCGSLTTA LAPNLTVLLL GWSLLEGLGA
ALILPAVVAL VALNFPTERR PTAYGLIAAS AAVAIGLGPL IGGIATTYFS WRWVFAGEVA
IVAVILALAR HIADRPSEGR PRFDVIGAVL SATGLGLFVY GVLRTSEWGW FVPKAGAPSW
LGMSASIWVM LAGVLVVWLF LLWQSRVLRR GGDPLVDPGL FANRQLSGGL IMFFLQFLVQ
MGVFFVVPLY LSVALGLSAI RTGVHILPLS LSLLAAASLI PKLFPRASPR LIVRLGVLSL
FAGALSLAAA LNADSSAAVV TIPLLLIGLG MGALASQLGA VTVSAVPDSR SAEVGGVQNT
VTNLGSSIGT ALAGSILIGT LTSSFLSSIE KNPAVPASVS AQASTKLAAG APFLSDSQLS
AALTKANVPP EQAQAAMQAN SAARLVAVRA AVAILALVAL IAMVFTGRIP NRQPGAPGAD
SARSNKSTKN VT
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