| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6553 |
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| Symbol | |
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| ID | 8337917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 7545813 |
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| End bp | 7546373 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644959648 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003117241 |
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| Protein GI | 256395677 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000129016 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.35741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTTTGA GGGAGTACGA GGAGGCGCAG TTCTGGGAGT TTGTGACGGC GCGACGGCGC
GGCCTGGTTC GGGTCGCGTT CCTGCTCACC GGCGACCACG GGTTGGCTGA GGATTTCGTT
CAGGACGCGT TGTTCCAGGC TTACCGCCAC TGGCGGCGGA TCGAGCGGCG TGAGCAGCCA
GAGGCTTACG TCCGCAAGAT CGTCGTGAAT CTGGCGAACT CCCGGTGGCG GCGGCTGAAG
GACCGCAATG TCTCGCTGTA CAGCAGCGTG CCGGATCGGC CGACGACCCG TGACGCGCAC
GCTGACGTCG ACCGCTCGGA CGAAGTGTGG CGGGCGCTGG CGACGCTGCC GACCGGTATG
CGGACGGTTA TCGTCCTGCG CTTCTACGAG GAGCTCAGCG AGGCCGAGAC CGCAGCCGTT
CTCGGCAAGT CCGTCGGGAC CGTCAAGAGC CAGTCGTCAC GGGGGCTGGC CCGGTTGCGC
GAGGTGCTGG GGGCGCCGGC CCAAGGCAAG CAGACCGATC CCGCTTACGT GGCGGGGCGA
TTGGGGAACA CGCATGTCTG A
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| Protein sequence | MALREYEEAQ FWEFVTARRR GLVRVAFLLT GDHGLAEDFV QDALFQAYRH WRRIERREQP
EAYVRKIVVN LANSRWRRLK DRNVSLYSSV PDRPTTRDAH ADVDRSDEVW RALATLPTGM
RTVIVLRFYE ELSEAETAAV LGKSVGTVKS QSSRGLARLR EVLGAPAQGK QTDPAYVAGR
LGNTHV
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