| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6526 |
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| Symbol | |
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| ID | 8337890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7521636 |
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| End bp | 7522196 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644959622 |
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| Product | uncharacterized peroxidase-related enzyme |
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| Protein accession | YP_003117215 |
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| Protein GI | 256395651 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00474121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.101119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGTACA TCGATCTTGG ACTGGATGAG CACGAGTTCC CGGGTATCAC CGGGCTACTG
GCGTTCCGCC CGGAGACGGC CAAACCGTTC CGCGATCTTC TCAATATCCT TCTGCACGGC
CCGCATTCCC TGTCGGCCGG CGAGCGTGAG CTCATCGCGG CATACGTATC AGGACTCAAC
GAATGCGTGT TCTGCTGCAC CTCGCACTCC GCCTTCGCCG CCGCACAGCT CGACGAGGGA
AGGCCACTGG TCGAGCAGGT GTTGGCGAAC CTGGACTCGG CGCCGATCTC CTCGAAACTG
CGCGCCCTGC TCCGCATCGC CGGTGCCGTG CAGCAAAGCG GGCGCAACGT GACCGAGAGG
CTCGTCGAGG ACGCGCGGGC CGAAGGCGCG ACCGACCTCG AAATCCACGA CACCGTACTG
ATCGCGGCAG CGTTCTGCCT TGCCAATCGC TACGTCGACG GCCTCGGAAC CATCCTCGGC
GACGACGCGC ACTACACGGA GACAACGAAG CGCATCGTCG AATCGGGATA CACAGGCCGG
CGGGTTCCCA GCAGCCGCTG A
|
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| Protein sequence | MAYIDLGLDE HEFPGITGLL AFRPETAKPF RDLLNILLHG PHSLSAGERE LIAAYVSGLN
ECVFCCTSHS AFAAAQLDEG RPLVEQVLAN LDSAPISSKL RALLRIAGAV QQSGRNVTER
LVEDARAEGA TDLEIHDTVL IAAAFCLANR YVDGLGTILG DDAHYTETTK RIVESGYTGR
RVPSSR
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