| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6504 |
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| Symbol | |
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| ID | 8337868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7496027 |
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| End bp | 7497769 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644959602 |
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| Product | glycoside hydrolase family 18 |
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| Protein accession | YP_003117195 |
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| Protein GI | 256395631 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.462594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.267228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCAC CCCCCACCCT GTACCGCACT GGCGTCAGCG GCGTCGTGGC CTTGTCACTC
GCCGCTGTCA CCGCCGTCGC AGGATCGATG CTGTTCGCGC ACTCCGCGAC GGCGGCACCC
ACCCTGGCCG TCACGGGCTA CGCCGAGGAG GGCACCGCCA ACAGCGCGAT TGACGCGAGT
GCGGCGGCGA TGGCCACTGT CGGCGTCGAC GGCATCAACA TAAACTCCGC CGGTACCAGT
GCTCCGGCGC CGGACGCCGG GGCGACCTCC CTGCTTGCCA AGGCGCACGC GGACAACCTG
CGAGCCGAGT TCTTGGTGGG CAACTATTCC AGCTCGATCG GCGACTTCGA CCCCGCCGCG
CTGGACAGAC TGCTGAGCTC GCCGAGCAAC ATCAACAGCG TGGTCACGAC CGTGGTGAAC
GCTGTGAATT CGCAAGGCTG GGACGGCGTC ACGATCGACT TCGAGTCGAT CCTCGGCCAG
GACGCCCAGG GCCTGGTCGA TTTCAGCACG GCACTGAAGC AGGCGATGCC GGCGGCCAAG
ACGGTCAGCA TCGACGTCAC GGCATACCAG ACCGCCGCCG AGTACACCGC CAACGGCTAC
AACCTCTCGG GTCTGGGCGG CGCCGTGGAC CGGATCGCGC TGATGGCGTA CGACGAGCAC
GGCCCGACCT GGAACGGCGT GGGCCCGATC GGCGGGCTGC CGTGGCAGGA AGCATGTTTG
CGGCAGCTGC TCACCCAGGT CCCCGCCGCC AAGGTCGACC TCGGCGTCGC AGGATACGGC
TACACCTGGC CGAAGACAGG CACCGGCAGG CAAGTCAGCG ACGCGCAGGC CCGGCAGATG
GTGGCGGGCG ACGGGTCGAC CGCGACCTGG GACAGCACCC AGGGCGAGTG GACCGCCACC
CTGAAGAACG GCACGGTCAT GTGGTGGTCC GATGCGAAGT CGTGGCCGCT GCGGGCCACA
CTCGCTCAGA AGTACGCGGT CCACGGCATG GCGCTGTGGT CGCTGGGCCT GTCCGACCCG
CTCCCGGTCA CCGCTCCGGC CAATGGCTTT TCGGTGGCGG CGAGCCCGGC GTCGGGCTCG
GTGGCGGCCG GCGCCTCGTC GACGTCGACA GTCAGCACCG CGGTCACGTC CGGTACCGCG
CAGTCGGTCG CTCTGACGGC CGGCGGTGTG CCCGCCGGCG CGAGTGTCTC GTTCTCCCCG
GCATCGGTGA CCGCGGGTTC GTCCTCGACG ATGACGGTGA CGACGTCCTC TTCCACACCG
GTGGGCACGT ATCCGATCAC GGTGACCGGA CGCGCGGCAT CAGGTAGTCA CACCGCGACG
TACACACTGA CGGTCACCAC CGCGAGCGGT TCCACCGTCT ACGAAGCGGA AGCTTCCTCC
AGCGTCCTGG CCGGCGGCGC GAAGGTCGTC ACCTGCGCGG CGTGTTCGGG TGGAGCCCGG
GTCGGATACC TCGGCGGCAC CGGCACGCTG ACCATGAAGA ACATCACCGT GGCCACCGCG
GGCAGCTACC AGGTCACGAT CGCGTACACC AACGGCGACA CCGGCAACCT CCGGATCATG
CTCAGCGTCA ACGGTGGCGC CAACGCCACC TTCACCGGCG CGCCGACGAC GAACTGGGAC
ACCCCCGCGA CCGGCACCAT CACTGTGAGC CTGGCGGTCG GAACCAACAC CATCCTGTTC
AGCAACACGG GAACCACCGG CGACGTCCCC GACATCGACA AGATCGCCGT GGTGTCCAAG
TGA
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| Protein sequence | MTSPPTLYRT GVSGVVALSL AAVTAVAGSM LFAHSATAAP TLAVTGYAEE GTANSAIDAS
AAAMATVGVD GININSAGTS APAPDAGATS LLAKAHADNL RAEFLVGNYS SSIGDFDPAA
LDRLLSSPSN INSVVTTVVN AVNSQGWDGV TIDFESILGQ DAQGLVDFST ALKQAMPAAK
TVSIDVTAYQ TAAEYTANGY NLSGLGGAVD RIALMAYDEH GPTWNGVGPI GGLPWQEACL
RQLLTQVPAA KVDLGVAGYG YTWPKTGTGR QVSDAQARQM VAGDGSTATW DSTQGEWTAT
LKNGTVMWWS DAKSWPLRAT LAQKYAVHGM ALWSLGLSDP LPVTAPANGF SVAASPASGS
VAAGASSTST VSTAVTSGTA QSVALTAGGV PAGASVSFSP ASVTAGSSST MTVTTSSSTP
VGTYPITVTG RAASGSHTAT YTLTVTTASG STVYEAEASS SVLAGGAKVV TCAACSGGAR
VGYLGGTGTL TMKNITVATA GSYQVTIAYT NGDTGNLRIM LSVNGGANAT FTGAPTTNWD
TPATGTITVS LAVGTNTILF SNTGTTGDVP DIDKIAVVSK
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