Gene Caci_6499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6499 
Symbol 
ID8337863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7489670 
End bp7490629 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content71% 
IMG OID644959597 
Productbeta-lactamase domain protein 
Protein accessionYP_003117190 
Protein GI256395626 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.735445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACCG GCTTCGCCGA ACCCGAGGTC GCCGAGATCG GTGACGGGGT CCTCGCCGTC 
GTCCAGTACG ACGGCGGCTG GTGCCTGAGC AACGCCGGCG TGATCACCGG CCCGGCCCGC
ACCGTCGTCG TCGACACCAT GGCCACCGAA CGCCGCTCCC GCCGCCTCCG CGAGATCGTC
GACCGGGCCG CCGAAGCCGC AGCCACGCGA ACGACCGAAG AAGGCCCCGC CCTCGCCGTC
GTCAACACCC ACCACCACGG CGACCACACC TTCGGCAACG CCGCCTTCGC CCCCGAAGCC
ACGATCATCG CCCACGAACG CACCGCCACG GCCATGGCCG AGCTGGGCCT GGCCCTGCTG
GCGGTATGGC CGCGCGCCGA CTGGGGCGAC ATCGAACTCA CGCTCCCGAC CACCACCTAC
CGCGACGCCT ACCGCTTCGG CGACGACGAC ACCCGCACCG ACGACACCCG CACCATAGAA
GTCCTGCACG TAGGACCGGC CCACACCCCC GACGACTCCG TCGTCCACCT CCCCGACGAC
GGCATCCTCT TCGTCGGCGA CGTGGTCCTC GGCGGCGCGA CCCCCTTCTG CCTGATGGGC
TCCGTCACGG GATCCCTGCG CGCGATCGAC CGCCTCCGCG CCCTGGGCGC CGAAACAGTC
GTCCCCGGCC ACGGCCCGGT AGGCGGTCCC GAACTGTTCG ACGTCGCCGA GGAATACCTC
CACTGGCTCC AAGACCTGGC GAAGAGCGGC CGCGAACGCG AACTGGACCC GTTGGCCCTG
GCCCGCACCA CCGACCTCGG CCGCTTCGCC GACCTCCGCG AAACCGAACG CCTCGTCGGC
AACCTCGCGC GCGTCTACGC AGAACTCGAC GGAGCCCCCG AAGGCACTCC GCTGGACGTC
CCCCGCATCT TCGGCGAGAT GGCCGAGTAC CACGGAGGCA TGCCGCCCTG CCACGCATGA
 
Protein sequence
MNTGFAEPEV AEIGDGVLAV VQYDGGWCLS NAGVITGPAR TVVVDTMATE RRSRRLREIV 
DRAAEAAATR TTEEGPALAV VNTHHHGDHT FGNAAFAPEA TIIAHERTAT AMAELGLALL
AVWPRADWGD IELTLPTTTY RDAYRFGDDD TRTDDTRTIE VLHVGPAHTP DDSVVHLPDD
GILFVGDVVL GGATPFCLMG SVTGSLRAID RLRALGAETV VPGHGPVGGP ELFDVAEEYL
HWLQDLAKSG RERELDPLAL ARTTDLGRFA DLRETERLVG NLARVYAELD GAPEGTPLDV
PRIFGEMAEY HGGMPPCHA