| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6497 |
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| Symbol | |
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| ID | 8337861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7486821 |
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| End bp | 7488713 |
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| Gene Length | 1893 bp |
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| Protein Length | 630 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644959595 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003117188 |
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| Protein GI | 256395624 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTGGA ACAACCCGGC CACGGCCGGT CCCCCCTACC GCTGGCGCTG GGCGGCCTTC
GCCGTCGTCC TGCTGGCCTC GGTGATGGAC CTGCTCGACT CGCTGGTCAC CAACATCGCC
GGTCCCACCA TCCGGGCCGA CATCGGCGGC GGGCCGGCGC TGATCCAGTG GCTCGGTGCC
GGCTACACGC TGGCCATGGC CGCCGGCCTG ATCACCGGCG GCCGGCTCGG CGACATCTAC
GGCCGCAAAC CGGTCTTCAT CGTCGGCGTC ATCGGCTTCA CCGTGGCCTC GGTGCTGTGC
GCGAGCTCCT TCTCCCCGGG CATGCTGATC GGCTGCCGGG TGGCGCAGGG CCTGTTCGGC
GCGGTGATGC TGCCCCAGGG CCTGGGCGTG ATCAAGGCGG TTTTCCCGCC GCAGGAGCTG
GCCAAGGCCT TCGGCGCCTA CGGGCCGGCG ATGGGCTTCT CCACCGTGCT CGGCCCGGTG
ATCGCCGGCA CCCTGATCGA CGCCAACCTG TTCGGCAGCA GCTGGCGCAT GATCTTCCTG
ATCAACCTGC CGCTGGGCCT GGTGGCGCTC GTCGGCGCGA TCAAGTACCT GCCGTCGGAC
CGCGACGAGC GCGCCCCGAT CAAACTGGAC CTGCTCGGCA CCGTGCTGGC CTCGAGCGCG
GCGCTGCTCG TGGTCTACCC GGTGGTGCAG GGCCGCTCGC TGGGCTGGCC GGCCTGGACC
TTCGTGATGA TCGCCGCCTC GGTGGTGGTC TTCGGGATCT TCGGCTGGGT GGAGACCCGC
ATCCACAACC GCGGCGGCGA CCCGCTGGTG GTGCCCACGC TGTTCCGCAA ACGGGCCTTC
ACCGGCGGCC TGTTCACCGG CCTGGCCTTC TTCACCGCGA TCGTCGGCTT CTCGCTGGTG
TTCACCGTCT TCGTGCAGAT CGGTCTGGGC TACTCCCCGC TGAAGGCCGG TCTGACCACT
TTGCCGCAGG CCGTCGGCAG CGTCGTCGGG TTCATCGCGG CCGGCGCGGG CCTGGCCGCC
AAGCTCGGGC GGCGCATGCT GCACCTGGGC CTGGTGAGCA TGACCGCCGG GGTGATCGGC
ACGTTCCTGA CGATCCACTA CGCCGGGACC GGCCTGACCC CCTACGACCT GATCCCCTCG
CTGCTGTTCA CCGGCATCGG CCTGGGCATG TTCCTGGCGC CGTTCTTCGA CATCGTGCTG
GCCGGGGTGG AGGCCGGCGA GTACGGCTCG GCCTCCGGCA CGCTGAACGC GGTGCAGCAG
TTCGCCGGGG CGCTCGGCAT CGCGGTGGTC GGCACGGTGT TCTTCGGGGT GCTCGGCGGC
CACGTCGCCT CAGCCGTGGA CAGCCACGCG CCGGCCCTGC GCACGCAGCT GAGCGTGGCC
GGGGTCAGCT CCGCGGACCA GGACACGATC CTGGCGAACC TGCACACCTG CGAGCAGGAC
CGGGCCACGG CCAGCGACCC GGCCGCCGTC CCGGCCTCCT GCGCCGTCCT GAACACCGCG
GTCGGCAAGG CCTCCGCCGA GCACGGCCCG GAGGTCGGCC AGGCCGTCGG CACCACCGCG
GTCAAGGCCG CCAAGGCGGG CTTCAGCTCG GCGGTGCAGG AGACGATCTG GACGGTCGTC
GGGCTGCTCG CCGCGGCGTT CGTCCTCGGA TTCGCCCTGC CGATGAAGGC CGCGCAGCAG
GGTGACTGGG CCAACCAGGA CTGGGGCGGC CAAGACGACG GCGACGGCGG CGCGGGCTGG
GGCGGCCAGG GCGGCGGGGA CGGCGCGGAC GGCGAGAACG CCGGAGCCGG AGCTGGAACC
GGCACTGGAA CCGGCGCCGA CGGCAAAGCC GTCCCCGGCC AGTCGGCCAA CGAATGGCAG
CAGTATTCGG GCACGCAGAA CACGGCGGAC TGA
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| Protein sequence | MTWNNPATAG PPYRWRWAAF AVVLLASVMD LLDSLVTNIA GPTIRADIGG GPALIQWLGA
GYTLAMAAGL ITGGRLGDIY GRKPVFIVGV IGFTVASVLC ASSFSPGMLI GCRVAQGLFG
AVMLPQGLGV IKAVFPPQEL AKAFGAYGPA MGFSTVLGPV IAGTLIDANL FGSSWRMIFL
INLPLGLVAL VGAIKYLPSD RDERAPIKLD LLGTVLASSA ALLVVYPVVQ GRSLGWPAWT
FVMIAASVVV FGIFGWVETR IHNRGGDPLV VPTLFRKRAF TGGLFTGLAF FTAIVGFSLV
FTVFVQIGLG YSPLKAGLTT LPQAVGSVVG FIAAGAGLAA KLGRRMLHLG LVSMTAGVIG
TFLTIHYAGT GLTPYDLIPS LLFTGIGLGM FLAPFFDIVL AGVEAGEYGS ASGTLNAVQQ
FAGALGIAVV GTVFFGVLGG HVASAVDSHA PALRTQLSVA GVSSADQDTI LANLHTCEQD
RATASDPAAV PASCAVLNTA VGKASAEHGP EVGQAVGTTA VKAAKAGFSS AVQETIWTVV
GLLAAAFVLG FALPMKAAQQ GDWANQDWGG QDDGDGGAGW GGQGGGDGAD GENAGAGAGT
GTGTGADGKA VPGQSANEWQ QYSGTQNTAD
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