| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6493 |
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| Symbol | |
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| ID | 8337857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 7483762 |
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| End bp | 7484538 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644959591 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003117184 |
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| Protein GI | 256395620 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAATC AGACCGCGCT GGTCACCGGC GCGACCCAGG GCATCGGCCT GGCCGTGGCG
CGGCGGCTCG GCGCGCTGGG CGCCCCGGTG TTCGTCTGCG GCCGCGACGG CGAGCGCCTG
GCCGCCGCGA TCGACGAGCT GCGCCGGGCC GGGGCCAAGG CCGACGGCCT GGTCGCCGAC
GTGCGCGACC CGGCTCAGAT CGACGCGCTG GTGGCCGCCG CGGTGGCCGC GTCCGGACCG
ATCGGCGTCC TGGTGAACAA CGCCGGGCGG CCCGGCGGCG GCGACATCGG GTCGGTCGCG
GACGACGTCT GGGACGACGT CATCGCCACC AACCTCACCA GCGTCTTCCG GGTGACCAAG
CGGGTTCTCG CCGACGGCGG CATGCGGGAG CTGCCCACGG CCCGGATCAT CAACATCGCC
TCCACCGGCG GCAAGCAGGG CGTCGTGCAC GCCAGCCCGT ACAGCGCCTC CAAGCACGGG
GTCGTCGGCT TCACCAAGGC CCTCGGGCTG GAGCTGGCCC GCACCGGCAT CACGGTGAAC
GCCGTGTGCC CCGGCTTCGT CGAGACCCCG ATGGCCGCCG CGGTGCGCGA GTACTACGCC
GGCGTGTGGG ACACGACCGT CGAACAGGCC TTCTCCCGGA TCACCGAGCG GGTCCCGCTG
GGGCGCTACG TCACGCCCGA GGAAGTCGCC GGCATGGTCG CCTACCTCGT CTCCGAGGAC
GCCGCACCGG TCACCGCGCA GGCGCTGAAC GTCTGCGGCG GCCTGGGCAA CTACTGA
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| Protein sequence | MLNQTALVTG ATQGIGLAVA RRLGALGAPV FVCGRDGERL AAAIDELRRA GAKADGLVAD
VRDPAQIDAL VAAAVAASGP IGVLVNNAGR PGGGDIGSVA DDVWDDVIAT NLTSVFRVTK
RVLADGGMRE LPTARIINIA STGGKQGVVH ASPYSASKHG VVGFTKALGL ELARTGITVN
AVCPGFVETP MAAAVREYYA GVWDTTVEQA FSRITERVPL GRYVTPEEVA GMVAYLVSED
AAPVTAQALN VCGGLGNY
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