Gene Caci_6436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6436 
Symbol 
ID8337800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7427960 
End bp7428421 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID644959536 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003117129 
Protein GI256395565 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.408457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGG CCGAACCACA GCGTGATCTC GTGCACCTCC TGAGCATGGC TGAGCACCGC 
GCGGTACGCC GCCAATCGGC CCTGCTGGAG GCCGAGGCCG AAGGCTGCTC GATCGAGCAG
TGGCGAGTGC TCAACCTGCT CGCCGACGGC TTGGGCCACA CCATGACCGA GGTCGCGGAA
TACGCCCTGC TTCCCGCCCC GACCGCGACC AAGCTCATCG ACCGCCTCGT CACGGACAAC
CTGGTCTACC GCCATCCCGA TCCAGCCGAC CGGCGACGAG TTCTCGTCCA CGCCGCGCAG
CGCGGCCGCG AGTTGCACGC CCGCCTCGCG CCATCGCTCG CCCGGATGCA ATCCGAGGTT
CTCAGACCGA TCGGCACAGG AGAGGAACTC GAAGCCCTGC TGGACCACTT GGCCCGGGTG
CTGGACCCAG GCTCGGCCCG GGCCGGGCAA GTGGTGGCGT GA
 
Protein sequence
MTAAEPQRDL VHLLSMAEHR AVRRQSALLE AEAEGCSIEQ WRVLNLLADG LGHTMTEVAE 
YALLPAPTAT KLIDRLVTDN LVYRHPDPAD RRRVLVHAAQ RGRELHARLA PSLARMQSEV
LRPIGTGEEL EALLDHLARV LDPGSARAGQ VVA