Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6399 |
Symbol | |
ID | 8337762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 7366237 |
End bp | 7367484 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959500 |
Product | glycoside hydrolase family 5 |
Protein accession | YP_003117094 |
Protein GI | 256395530 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.337804 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACA GCAAGCGACG GCAGTGGGCG TTCATCGGAG CCGCCGCGGC CGTGGTCCTC GCGGCCGCCG GCATCGCGAC CGCCGTCACC GGCGGCGATC CCGGGCAGCC CTCGGCGTTC GGCCACACGC CGGCGGCGAG CACCACCGCG GCCAGCTCCA CCACCGCGGC GACCTCGGGA ACGTCCGGCA CGGTCCCGGC CGCCCCGGGC ACCGGTTCGA GCTCCGCGCC CGGAACCGCG GCGGCCACGA GTGCCGGCAA GCCCTCGGCG CTGGCGGACA TGAAGTGGGG TCTGGACTAC AGCGACACGC TGACGTTCGA CACCCCGGCC CAGCTCGGCA CCGCGCTCGA CGACGCCAAG CGGCTCGGGA TGGACTACAT CCGCGTCGAC TTCGGCTGGC AGGACTACCA GTCCTTCTCG AACTACGCGC CGGACTTCGG CAAGTTCGAC AACGTCGTCG CCGCGGCGAA CGCCCGCGGC CTGAAGGTGC TGGCCACCCT GGACTTCCCG CCGCCGTGGG CGCGCCGGGC CGCCTGCAAG GACACCGCCG CCTGCCCGCC CGCCGACAAC GCGGTCTACG CGAAGTTCGT GAAGCAGGCG GTCGCGCGCT TCTCGGCCCG GGGCGTCCAC TACTGGGAGG TGTGGAACGA GCCGAACATC GTGGCCTGGG CCCCGACCCC TGACGCGGCG GACTACACCA AGCTCCTGGT GACCGTCTCC GCGGCCATCC GCGCCGCGGA CCCGCACGCC TTCATCCTGA TGGGCGGCCT CGCGGCGAAC CACCCGGGCA ACGGCGGGCC GTTCATCAAG CCGTACGACT TCATCACGGC GGTGGCCCAG AACGGCGGAC TGAAGTCCAT CGACGCGATC AGCTACCATC CCTACCCGGA CGGCGACCCG GCGACCAGCA TGACCTTCCA GGCCATCAGC CAGTCGCCGA CGAGCATCAT CACTGCCCTG AACCAGGTCG GGGCGCCGAA CATGCCGATC TGGATCACCG AGACCGGGGC GGCGGTCGGC GGCACGCCGG CCCAGCAGAA AGAATCGGAG GCCTTCCAAG TCCAGGAGGC CAAGCGGGAG GTGGAGGTGT TGTCCTCGTA TCCGAACGTG GCGTCCTTCT TCTGGTTCTC CTATCAGGAC GTGCCCGCCG ACCACCTGAT CTACGGGGTG CGCAGGGCCG ATGGGACCTA CCGGCCCTCC TTCGCCACCC TGCAGCAGAT CATCGCCGAC GCGAAGAAGT CACGATGA
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Protein sequence | MANSKRRQWA FIGAAAAVVL AAAGIATAVT GGDPGQPSAF GHTPAASTTA ASSTTAATSG TSGTVPAAPG TGSSSAPGTA AATSAGKPSA LADMKWGLDY SDTLTFDTPA QLGTALDDAK RLGMDYIRVD FGWQDYQSFS NYAPDFGKFD NVVAAANARG LKVLATLDFP PPWARRAACK DTAACPPADN AVYAKFVKQA VARFSARGVH YWEVWNEPNI VAWAPTPDAA DYTKLLVTVS AAIRAADPHA FILMGGLAAN HPGNGGPFIK PYDFITAVAQ NGGLKSIDAI SYHPYPDGDP ATSMTFQAIS QSPTSIITAL NQVGAPNMPI WITETGAAVG GTPAQQKESE AFQVQEAKRE VEVLSSYPNV ASFFWFSYQD VPADHLIYGV RRADGTYRPS FATLQQIIAD AKKSR
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