Gene Caci_6380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6380 
Symbol 
ID8337743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7343675 
End bp7344097 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content69% 
IMG OID644959481 
Producthypothetical protein 
Protein accessionYP_003117075 
Protein GI256395511 
COG category 
COG ID 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.219202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0893608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA CCACCCCGGA GACCGCGGCC GACACCGCTG CGGTGCACGC GCTGCTCGAC 
CAGCTCGAGA CCGCCTGGGC CGAGCACGAC GCCAAGAAGT TCGCCGACCT GTTCGCGCCG
ACCGGCACGG TGGTGCTGCC CGGCGACATC CTGATGGACG GGCGGGCGCA TATTCAGGGT
TTCATGACGC AGGCGTATCA GGGTCCGTAC AAGGGGACGA CTGTCACCGG CCGGGCGCTG
GTCACGCATT TCCACAGCTC GGAGTTCGCG GTCATGGTCA CCGAGGGCGG CGTGATGGCG
CCGGGGGAGA CCGAGGTCGC TCCCGAGCGT GCGATTCGGG CGACGTGGGT GTGCGTGAAG
ATCGACGGCC AGTGGCTGCT GGCGGCCTAC CAGAACAGCC CGCTGAACGT GCCGACGGCC
TGA
 
Protein sequence
MTQTTPETAA DTAAVHALLD QLETAWAEHD AKKFADLFAP TGTVVLPGDI LMDGRAHIQG 
FMTQAYQGPY KGTTVTGRAL VTHFHSSEFA VMVTEGGVMA PGETEVAPER AIRATWVCVK
IDGQWLLAAY QNSPLNVPTA