Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6374 |
Symbol | |
ID | 8337737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7335987 |
End bp | 7336754 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959475 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003117069 |
Protein GI | 256395505 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.169212 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATCA CACGTTTCGC TGCCGAACAA GCGATAGCCA CCATGTGGAA CCGCTACGCC GATCCGCTAT CGCTGGATGA GATCGCCGAC TCGGCGATCC TCAGCAAATT CTATTTCTCC CGGGTCTTCA GGTCCCTGAC CGGGACCTCC CCCGGGCGAT TCTTGTCCGC AATCCGTTTG TTCAAGGCCA AGAACCTCCT GCTCGAGACG GACATGAGCG TGACCGAGGT CGCCTACGGC GTGGGCTACA ACAGCCTGGG CACCTTCACC AGCCGGTTCA CCCGCAGCGT CGGCGCCTCC CCGGGCCGCT ACCGGGCGAT GTCGCTGGCG GGCACGCACT CCATCTTGGA CATGGCGCCC GTGCCCGGTC CCGGCCCGCA CGGCGAGCTG TCCGGGGTCG TGTCGTTCCC GGAGACCGAC GACCCGCTGC GGGTCTACGT CGGGCTGTTC CCGGGCCCGG TCGTCGAGGG GATCCCCGTG GCCTGCGAGG TCCTGCAGGC GCCCGGACCG TTCGTCCTGC GGGACGTGCC GGTGGGCACC TGGTACCTGC GCGCCGCCGC CGTCGGGCTG CGCCAGGACG GGTCCCTTCC CTGGCAGCGC CGTCCGGCGC TGCTCGGCGA GCACGGCCAC CACCAGGTGG GCGCGCACGT CAGGGTGCAG GTGGGGGAGA TGGCACTGCG GCCCTCGGGG TTCTTGGACC CGCCGATCCT GCGCGCCCTG CCCGAACTCG ACAACTGGGA GCTGGCCGAG CTGCACCGGG TCGCCTGA
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Protein sequence | MDITRFAAEQ AIATMWNRYA DPLSLDEIAD SAILSKFYFS RVFRSLTGTS PGRFLSAIRL FKAKNLLLET DMSVTEVAYG VGYNSLGTFT SRFTRSVGAS PGRYRAMSLA GTHSILDMAP VPGPGPHGEL SGVVSFPETD DPLRVYVGLF PGPVVEGIPV ACEVLQAPGP FVLRDVPVGT WYLRAAAVGL RQDGSLPWQR RPALLGEHGH HQVGAHVRVQ VGEMALRPSG FLDPPILRAL PELDNWELAE LHRVA
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