Gene Caci_6361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6361 
Symbol 
ID8337724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7316779 
End bp7317468 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content70% 
IMG OID644959462 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003117056 
Protein GI256395492 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.529564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.439154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCCTC GCCGGGCGCA GTCCGATCTG CGCGAAGCCC TGTTGGAAGC CGCCGCACGA 
ATTCTCGCGC AGGACGGCTC TGTCGGGCTG AGCACCCGCC GCCTGGCCAA GGAGGTGGGC
AGCTCGACGA TGGCCGTGTA CACGCACTTC GGGAGCATGG ACGACCTGGT GCGAGCCGTC
GTGCACGAGG GGTTCGCCCG GCTGAACACG TCCATGATCG CGATCGGCGA TTCCGCGGAT
CCGGTGGCCG ACGTCGTGGC GCACGGCCGG GTCTACCGCT GGAACGCGCA TCAGAACGCT
GACCTGTACC AGGTCATGCT CGGCTCGCTG AACATCGCGG GGTTCTCCCT GACCGACGCC
GACCGGCTGC ACGGCCGCTA CGTGCTGGAC ATCCTGGTCG CCTCGGTGCG GCGGTGCATG
GCCGCCGGGC GGTTCCAGGA AGGCGATCCG GAGCTGGTGG CGCACCTGTT CTGGACCGCG
CTGCACGGCA TCGTGACCCT GGAGCTAGGC GGGTACCTGT TCGCGCCCTA CGACGCCGAC
GCGTGCTTCG AGGCTCAGGT GCACAGCATG ATCGTCGGCA TCGGCGACGA CAGCGAGGAC
GCGTGGGCCT CCATGCGCCG CTCGGTCGAG ATCGTCGACG CCGCCGGCTT GGAGGCCGGC
GAGCAGCCCG CGCCCGCCGC CGCCGGGTAG
 
Protein sequence
MSPRRAQSDL REALLEAAAR ILAQDGSVGL STRRLAKEVG SSTMAVYTHF GSMDDLVRAV 
VHEGFARLNT SMIAIGDSAD PVADVVAHGR VYRWNAHQNA DLYQVMLGSL NIAGFSLTDA
DRLHGRYVLD ILVASVRRCM AAGRFQEGDP ELVAHLFWTA LHGIVTLELG GYLFAPYDAD
ACFEAQVHSM IVGIGDDSED AWASMRRSVE IVDAAGLEAG EQPAPAAAG