Gene Caci_6360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6360 
Symbol 
ID8337723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7314604 
End bp7316577 
Gene Length1974 bp 
Protein Length657 aa 
Translation table11 
GC content67% 
IMG OID644959461 
ProductASPIC/UnbV domain protein 
Protein accessionYP_003117055 
Protein GI256395491 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0438611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.300912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCGTG GAAGATTGAG AACGCTGATC CCGGCGCTCA CCGCCATCAT CGCTCTCCTC 
ACCGTCTACG TGGCGGTGGG GAACCCGGCC GAGGCGGGTG AGGCTTCGCA GACAGCTGCG
AAGTATTCGT TCAAACAGAT GCCGATCGCC ATGCCGCCGG GCTATGACGA TCAGAAGATG
AACACGATCC GCCAAGTGAA CCCCGCCTAC TACAAAGTCC GTTCCTGGAT GTCGGCGGTC
GGCGCGAGCG TGGCCATCAA CGACGTGACC GGCCACGGCC GCTCCGACGG GATGTGCCTG
GTCGACACTC GGACCAACGA CGTCGTCGTC ACCTACACCC CGACCGCCCC GGCCGCGGAC
CAGTTCACGC CGTTCGTGCT GAACGCGGCG CCGCTGCCGA TCGACGACAC CATGGCGCCG
ACCGGCTGCG TGCTCGGCGA CTTCACCGGT GACGGCCGCA TGGGCATGCT GGTCTACTAC
TGGGGACGCA CCCCGATCCT GTTCCTGCCC AAGGCCGGAG CCACTGCCGT CTCGGCGGAG
GCCTACCAGC CGCAGGAGCT GGTCAGCGGC GTCGACACTG ACGGCAAGTA CACCGGCCCG
CAGTGGAACA CCGACGCCAT CGCGGTCGCG GACCTGGCCG GCACCGGCCA CCCGGACATC
GTCATCGGGA ACTACTTCCC GGACAGCGGC ATCCTGGACG TCCACGGCCA GAACAACGTG
GTCATGCCGA ACTCGCTGTC CAGCGCCAAC AACGGCGGCG GCCTGCACTT CCTGCGCTGG
GTGAGCGCCA CCGGCGGGGA CGCCCCCTCG GCGAAGTACG TCGAGGACAA GGACGCCATC
CCCTTCCACG ACAGCACCGG CTGGACGCTG GCCCTGGGAA CCGCCGACCT GACCGGCTCG
GGCAAGCCCG ACCTGTACGA CGGCAACGAC TTCGGCCACG GCCACCTGCT CTACAACGTC
TCCACGCCGA CCCAGCTGAA GTTCACCGAG GCCTACGGCG ACCGCACGGC GACCACCCCG
AAGTCCTTCG TGATGGGCAA CGGCTCGTTC AAGGGCATGG GCGTGGACTT CGCCGACATG
AGCGACAAGG GCCACTTCGA CTTCATGGTC AGCGACATCA CGCAGCCCTG GGGTCTGGAG
GAGAGCAACT TCGTCTTCAA GAACGACACC AAGTCCAACG CTGAGATGAC CTCCAAGCTG
GCCTCCGGGG TGGCGCCGTT CACCCAGAGC GCGGCCGGGG ACGGCCTGGC CTGGAGCGGC
TGGGCCTGGG ACGTGAAGAT GGGCGACTTC CTCAACGACG GCAGCCAGGA CGTGGTGCAG
GCCCTGGGCT TCATCAACGG CAGCATCAAC CGCTGGCCGT GGATGCAGGA GATGGCCACG
ATGAACGACG ACCTGCTGGC CAACCCGGCG ATGTGGCCGA ACTTCCAGCC CGGGGACGAC
GTGTCCGGCC ACCAGCCGTT CGCGTTCTTC GCCAAGAACT CCTCGGGCAA GTACGTCAAC
ATCAGCAAGC AGCTGGGCTT CACCAACGAC ACCCCGAGCC GCGGCATGGC GCTGGCGGAC
ACCACCGGCA GCGGCCACCT GGACTTCGCG GTGGCGCGGC AGTGGGGCGC TCCGGAGTTC
TACGCCAACA CCGCGGACGT CGGCGACCAG ATGACCCTGA ACCTGTACCG CCCGTCCAGC
GACGGCCAGG CGAGCAGCGG TCTTGAGGGT ATCGGCAGCC CGGCCTACGG GACCACGGTC
ACCGTCCACA CGCCCGGCGA GCCGCAGATG GCCCAGGTGG ACGGCGGCAG CGGCCACGAC
GGCTACCGCT CCTTCCAGGT CCGCTTCGGC CTCGGCATGA ACATGGGCCC GCAGACCGTC
ACCGTCCAGT GGCACGACAC CTCCGGTGCC CTGCACTCGC AGGACATCAA GCTGACCACC
GGAACCCACA ACCTGATGCT GACCGACCAC ATCCAGGAGG TCCCGCAGTC ATGA
 
Protein sequence
MLRGRLRTLI PALTAIIALL TVYVAVGNPA EAGEASQTAA KYSFKQMPIA MPPGYDDQKM 
NTIRQVNPAY YKVRSWMSAV GASVAINDVT GHGRSDGMCL VDTRTNDVVV TYTPTAPAAD
QFTPFVLNAA PLPIDDTMAP TGCVLGDFTG DGRMGMLVYY WGRTPILFLP KAGATAVSAE
AYQPQELVSG VDTDGKYTGP QWNTDAIAVA DLAGTGHPDI VIGNYFPDSG ILDVHGQNNV
VMPNSLSSAN NGGGLHFLRW VSATGGDAPS AKYVEDKDAI PFHDSTGWTL ALGTADLTGS
GKPDLYDGND FGHGHLLYNV STPTQLKFTE AYGDRTATTP KSFVMGNGSF KGMGVDFADM
SDKGHFDFMV SDITQPWGLE ESNFVFKNDT KSNAEMTSKL ASGVAPFTQS AAGDGLAWSG
WAWDVKMGDF LNDGSQDVVQ ALGFINGSIN RWPWMQEMAT MNDDLLANPA MWPNFQPGDD
VSGHQPFAFF AKNSSGKYVN ISKQLGFTND TPSRGMALAD TTGSGHLDFA VARQWGAPEF
YANTADVGDQ MTLNLYRPSS DGQASSGLEG IGSPAYGTTV TVHTPGEPQM AQVDGGSGHD
GYRSFQVRFG LGMNMGPQTV TVQWHDTSGA LHSQDIKLTT GTHNLMLTDH IQEVPQS