Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6265 |
Symbol | |
ID | 8337628 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7206909 |
End bp | 7207598 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644959366 |
Product | polysaccharide deacetylase |
Protein accession | YP_003116960 |
Protein GI | 256395396 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.249412 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCATCG GATTTTCCCG CAAAGTCGGG GCACTTCTCG TCGCGGCCGT CTTGGCGCTG CTCGCGATCG GATTCTCCGC GGCACCGGCC GCCGCGTCGA GCAAGGCGGC GGCCGGCAAA GCTGTGACAA GCAAGGTCGT GTACATCACC TTCGACGACG GGCCCAGTCC CGTCTACACG CCGAAGGTCC TCAAGGTGCT GGCGCAGTAC GGCGTGCACG CCACGTTCTT CGAGGTCGGC CAGAACGTGG CCGCGCACCC GTCGGTGACC ACGCGGGTGT ACCGCGCGGG CAACAGCGTG CAGAACCACT CCTGGTCCCA CCCCGACCTG CGCAAGCTGT CGGCATCGCA GTTCGCGTAC CAGGTCAACG CCACCGACCG GCAGATCCGC GCGCACACCG GCTACCGTCC CTGCTGCCTG CGCCCGCCGT ACGGCGCGGT CAACGGCGCG GTGCGCTCCC GGACGGCGGC ACTCGGCAAG AAGATCGCAC TGTGGACGGT CGACCCGCGC GACTGGTCGC GGCCCGGCGC CTCGGCGATC CAGGCGCGCG TGCTCAGCCA CGTACGACCG GGCTCGGTAG TGCTGCTGCA CGACGGCGGC GGCGACCGCA GCCAGACCGT CGCGGCACTG AGCGGCATTC TCAGGACCCT GAAGGCGCGG GGCTACACGT TCGCGACGTG GGCTCGGTAA
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Protein sequence | MIIGFSRKVG ALLVAAVLAL LAIGFSAAPA AASSKAAAGK AVTSKVVYIT FDDGPSPVYT PKVLKVLAQY GVHATFFEVG QNVAAHPSVT TRVYRAGNSV QNHSWSHPDL RKLSASQFAY QVNATDRQIR AHTGYRPCCL RPPYGAVNGA VRSRTAALGK KIALWTVDPR DWSRPGASAI QARVLSHVRP GSVVLLHDGG GDRSQTVAAL SGILRTLKAR GYTFATWAR
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