| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6214 |
|---|
| Symbol | |
|---|
| ID | 8337577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 7153934 |
|---|
| End bp | 7154845 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644959315 |
|---|
| Product | helix-turn-helix domain protein |
|---|
| Protein accession | YP_003116909 |
|---|
| Protein GI | 256395345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0199858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGG TACCGGCTGA GCAATCGGTC GATCAGCTTG AAGGGTCCGA GGACAGCAGC
CCCGCGGACA GCGGCCCCAC TGTGCTGCGC ATGCTGCTGG GGTCGCAGCT GCGCAAGTTG
CGCGTCGCTG CCGGTGTCAC GCGTGGTGCG GCGGGCTATG AGATTCGCTG TTCCCATACC
AAGATCAGCC GGATGGAGCT GGGGCAGGTC AGCTTCAAGC GGCGGGATGT CGCCGATTTG
TTGACCCTGT ACGGCGTCTC CGATGAGGCC GAGCGCGACG CGATCCTCAC GCTGGCTGCG
CAGGCCAATG CGCGCGGCTG GTGGCACGGG TTCGCCGATC TGATGCCTGG CTGGTTCGAG
GTCTACGTCG GGTTGGAGGA GGCTGCCTCA GTCATTCGCG GCTACGAGGC GCAGTTCATC
CCCGGGTTGT TGCAGAGCGA GGATTACGCG CGTGCCGTCA TCCGCGACGG CTATCCGCTC
GCCGCGCCCG ACGAGATCGA GCGGCGGGTT CGGCTGCGGA TGAACCGGGC GCGGCTGGTG
CACAGCCCTG AGCCGCCGCG GATCTGGTCG ATCATCGATG AGGCGGCCGT GCGTCGTCAG
CCCGGCGGCA CGGCCGTCAT GCGGGCCCAG TTGGAGCACC TGCTGGAGCT GTGCCGGCTG
CCGCACATCA CGGTCCAGGT CGCGCCGTTC GCGCGCGGGG GTCCGGCGGC GGCCGGGCCG
TTCACCATCC TGCGCTTCGC CGAGCCGGCG CTGCCCGACA TCGTCTACTT GGAACAGCTC
ACCGGTGCGG CGTATCTGGA CAAGCGCGAG GACCTGGACG CGTACACGAC CGTCATGGAC
CAGCTGGCGG TGCAGGCGCT GACCCCCGCC GACACCATCG GTTTCCTCAC CCGGATGATC
GAAGGGTACT GA
|
|---|
| Protein sequence | MSSVPAEQSV DQLEGSEDSS PADSGPTVLR MLLGSQLRKL RVAAGVTRGA AGYEIRCSHT
KISRMELGQV SFKRRDVADL LTLYGVSDEA ERDAILTLAA QANARGWWHG FADLMPGWFE
VYVGLEEAAS VIRGYEAQFI PGLLQSEDYA RAVIRDGYPL AAPDEIERRV RLRMNRARLV
HSPEPPRIWS IIDEAAVRRQ PGGTAVMRAQ LEHLLELCRL PHITVQVAPF ARGGPAAAGP
FTILRFAEPA LPDIVYLEQL TGAAYLDKRE DLDAYTTVMD QLAVQALTPA DTIGFLTRMI
EGY
|
|---|
| |