Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_6147 |
Symbol | |
ID | 8337510 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 7073701 |
End bp | 7074435 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644959248 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003116842 |
Protein GI | 256395278 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.200947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA TGCCTGCGAA TATCGCGAAC CCGACGGAAC CCTGGCGCTT CCTGGTCGTC GACGACGAGC CGGACCTGGT GGAGGTCGTC TGCGGCGCGC TGCGGCACGA GGGCTGGGAC GCTGTGGGCG CGCACGACGG CCGCGAGGCG GTCTCGGCCG CGGCGACGTA CCAGCCGGAC GCCGTGGTGC TGGACATGAT GCTGCCCGAC ATGGACGGCA TGGAGGTCAT GCGGCGCATC CACACCTCCC GCCCCGAGGT GCGGGTACTG TTCTTGACCG CGCGCGACGC CGTGGAGGAC CGGATCGCCG GGATCGCCGC CGGCGGCGAC GACTACGTGG CCAAGCCGTT CAGCCTGGAC GAGGTGGTGG TCCGGCTGCG CAGCCTGGTG CGGCGCACCG CGCGCGGGCG CACCGGCCGG GTCGCGAGCC CGGACTGCCT GGTGGTCGGC GACCTGGTGC TGGACGAGGC GGCCCGGGAG GTGACCCGCG GCGGTGAGCC GATCGACCTG AGCCCGAAGG AGTTCTCGCT GCTGTGGTTC CTGATGCGGC ACCCGCGCCA GGTGCTGAGC AAGTCCCAGA TCCTGGCCGA GGTGTGGTCC TACGACTACG GCGGGCAGGC GCACGTCGTG GAGCTCTACA TCAGCTACCT GCGCAAGAAG ATCGACGCCG GCCGCCCGGC GATGATCCAC ACGGTGCGCG GCGCCGGCTA CGTCATCAAG GCCGCCGCTC CATGA
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Protein sequence | MTAMPANIAN PTEPWRFLVV DDEPDLVEVV CGALRHEGWD AVGAHDGREA VSAAATYQPD AVVLDMMLPD MDGMEVMRRI HTSRPEVRVL FLTARDAVED RIAGIAAGGD DYVAKPFSLD EVVVRLRSLV RRTARGRTGR VASPDCLVVG DLVLDEAARE VTRGGEPIDL SPKEFSLLWF LMRHPRQVLS KSQILAEVWS YDYGGQAHVV ELYISYLRKK IDAGRPAMIH TVRGAGYVIK AAAP
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