Gene Caci_6101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_6101 
Symbol 
ID8337464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp7020758 
End bp7021369 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID644959203 
Productprotein of unknown function DUF552 
Protein accessionYP_003116797 
Protein GI256395233 
COG category[S] Function unknown 
COG ID[COG1799] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.608193 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0861444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCA TGATGCGCAG AGCAGCGGTC TACCTCGGGC TTACCGACGA ACAGCGGTTC 
GAGGACGAGC GGTACTACGA CGAATACGAG GACGAGTACG AGCCCGAGGC CGCCGAGCCC
GCGGCGGCAC CGGAGCCGGT GCACCGCGAG CCGGAAGCCG GCTCGGGCGG GGCGCTCGTC
GTCGCGCAGA ACGACCGCCG CGCCTTCGCG GCGGCCTCCA ATGTGACGGT GATGCCGGAC
CGCTCCGAGC GGTCCTCGCG AGCCGACCGA GCCGAGAGAG GTGGACCGGT GATGTACAGC
GTCCCGACGG ACCGGTCGGC GGACCGCGAA GCGTCCTACC GCATCACGAC GCTGCATCCG
CGCACCTACA ACGAGGCGCG CACGATCGGC GAGCACTTCC GCGAGGGAGT TCCGGTGATC
ATGAACCTGA CCGAGATGGA GGACGCCGAC GCCAAGCGCC TGGTGGACTT CGCGGCCGGG
CTGATCTTCG GGCTGCGCGG GAACATGGAG CGGGTGACGC AGAAGGTGTT CCTGCTGTCG
CCTGCTAATG TCGATGTGAC GGCCGAGGAC AAGGCCCGCA TCGCTGAGGG CGGCTTCTTC
AACCAGAGCT GA
 
Protein sequence
MAGMMRRAAV YLGLTDEQRF EDERYYDEYE DEYEPEAAEP AAAPEPVHRE PEAGSGGALV 
VAQNDRRAFA AASNVTVMPD RSERSSRADR AERGGPVMYS VPTDRSADRE ASYRITTLHP
RTYNEARTIG EHFREGVPVI MNLTEMEDAD AKRLVDFAAG LIFGLRGNME RVTQKVFLLS
PANVDVTAED KARIAEGGFF NQS