Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5997 |
Symbol | |
ID | 8337360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 6917861 |
End bp | 6919027 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644959102 |
Product | glycine oxidase ThiO |
Protein accession | YP_003116696 |
Protein GI | 256395132 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | [TIGR02352] glycine oxidase ThiO |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.217156 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGACCA TGCGTTCGCC TGCCGGTTCC GACGTCCTGA TCATCGGCGG CGGCCTGATC GGGTTGGCCG CCGCGTGGCG GACCGCCGTG CGCGGGCTCT CGGTGACGAT CTGCGATCCG GCGCCGGGGT CCAACGCCTC CTTCGCCGCC GCCGGCATGC TCACGCCGGT CACCGAGCTG CACTACGGCG AGGAGACGCT CCTGAGCCTG AACCTGGCCT CCGCCAAGCG GTATCCCTCC TTCATCGAGG AGCTGCGCGA GGCCTCCGAC GGCCTGGATC CGGGGTACCG CGAGGCCGGG ACGCTGGTCG TCGCCTTCGA CGCCGACGAC CGCGAAGTCC TGTCCGAGCT GCACGTCTTC CAGCAGTCGC TGGGGCTGAA AGCCGAGTGG CTGACCGGCC GGGAGGCGCG GCGGCTGGAG CCGATGCTGG CGCCGGGCGT GCGCGGCGGG CTGCTGGTCT CCGGCGACCA CCAGGTCGAC AACCGGATGC TGCTGGCGGC GTTGTTCGCG GCGCTGGAGC GGGATCCGAA GGTCACGATC GTGCGCTCGA AGGTCGCCGA GCTGACCGTG ACCGGGGATC GCGCGACCGG CGTGGTCCTC GAAGACGGAA CCGCTTTGCC GGCAGCGCAG GTGGTGCTGT CCGCCGGCTG CTGGTCCGGG CAGATCGCCG GCATCCCGGA GGAGCTGCTG CCGCCGGTGC GTCCCATCAA GGGGCAGATC CTGCGGCTGG CCATACCGGA CGTCTTCAAG CCGTTCCTGT CCCGGACGGT GCGCTACGTC GTGCGCAACA ACCACGCCTA CCTCGTCCCC CGCGCACACG GCGAACTCGT GCTCGGCGCC ACGGTCGAGG AGCAGGACTA CGACACCGCG GTCACCGCCG GCGGCGTCTA CGAGCTGCTG CGCGACGCCC GGGAGCTGGT CCCCGGCATC ACCGAGCTGC CGCTGATCGA GACCCGCGCC GCGCTGCGCC CCGGCACGCC GGACAACGCC CCGCTGATCG GTCCCACGGC GCTGCCCGGG CTGCTGTACG CCACCGGCCA CTACCGGCAC GGCGTGCTGC TCACCCCGGC CACCGCGGAC GGCGTCGCGG AGATCCTGGC GACCGGGACG GTCCCGGAGG CGCTGGCGCC CTTCAGTCCC CGACGGTTCG AGCATCACCA GAAATGA
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Protein sequence | MWTMRSPAGS DVLIIGGGLI GLAAAWRTAV RGLSVTICDP APGSNASFAA AGMLTPVTEL HYGEETLLSL NLASAKRYPS FIEELREASD GLDPGYREAG TLVVAFDADD REVLSELHVF QQSLGLKAEW LTGREARRLE PMLAPGVRGG LLVSGDHQVD NRMLLAALFA ALERDPKVTI VRSKVAELTV TGDRATGVVL EDGTALPAAQ VVLSAGCWSG QIAGIPEELL PPVRPIKGQI LRLAIPDVFK PFLSRTVRYV VRNNHAYLVP RAHGELVLGA TVEEQDYDTA VTAGGVYELL RDARELVPGI TELPLIETRA ALRPGTPDNA PLIGPTALPG LLYATGHYRH GVLLTPATAD GVAEILATGT VPEALAPFSP RRFEHHQK
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