Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5986 |
Symbol | |
ID | 8337349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6907612 |
End bp | 6908559 |
Gene Length | 948 bp |
Protein Length | 315 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644959091 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_003116685 |
Protein GI | 256395121 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG TGATCCCCGG CGGGTCCGGG CACGTCGGTG CGGTGGCGGA GCGGGCGTTC ACGGCGGCCG GGCACTCGGT CGTGGTGCTC AGCCGGAATC CGCGGCGGGC GAACGAGGTG CGCTGGGACG GCCGGACGCT CGGGGCGTGG GCGGCGGAAC TCGACGGGTG CGACGTCGTG CTGAACCTGG CGGGGCGCAG TGTCAGTTGC CGCTACACCC CGGCGAACCT TCGCCAGATG ATGGACTCGC GGGTGCTGTC GACCCGGGTG GTCGGCGAGG CGATCGCCCG CGCCGAGCGT CCGCCCCGGG TGTGGCTCCA GGCGAGCACG GCGACGATCT ACGCGCACAC CTTCGGCGCG GCGAACGACG AAGGCGGCGT CATCGGCGGC GGCGAGGCCG GGGTGCCGGC GTATTGGGCG TACAGCGTCG AGATCGCGAA GAACTGGGAG CGCGAACAGG CCGACGCCGA CGCCCCGGAC ACCCGCAAGG TGGCGCTGCG CTCGGCGATG GTGATGGGCC CGGAGCGCGG CGGGATCTTC GACTACCTCG CGTGGCTGGC CCGCCTCGGC CTCGGCGGCG CGGTCGCGGG CGGAGGCCAG TACGTGTCCT GGATCCACGA CCGCGACTTC ACCGCCGCCC TCGAGTTCCT CATCACCCGC ACCGACCTCG AAGGACCGGT CAACCTCGCC GCCCCGAACC CGCTGCCCCA GCGCGCCTTC ATGCGCACCC TGCGCCGCGC GTGGGGCATG CCGCTCGGTC TGCCCGCGAC CCGCGCCATG GCCGCGATCG GAGCCTTCGC GCTCCGGTCG GACACCGAGC TGCTTCTCAA GAGCCGCCGT GTGATTCCCG GACGCCTGTC CGACGCCGGA TTCCGCTTCG CCTATGAGGA TTGGGACGAC GCGGCGCGGG ATTTGGTGCG GCGGGTGCGG GCCGGCCGGA ACCTCTGA
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Protein sequence | MKIVIPGGSG HVGAVAERAF TAAGHSVVVL SRNPRRANEV RWDGRTLGAW AAELDGCDVV LNLAGRSVSC RYTPANLRQM MDSRVLSTRV VGEAIARAER PPRVWLQAST ATIYAHTFGA ANDEGGVIGG GEAGVPAYWA YSVEIAKNWE REQADADAPD TRKVALRSAM VMGPERGGIF DYLAWLARLG LGGAVAGGGQ YVSWIHDRDF TAALEFLITR TDLEGPVNLA APNPLPQRAF MRTLRRAWGM PLGLPATRAM AAIGAFALRS DTELLLKSRR VIPGRLSDAG FRFAYEDWDD AARDLVRRVR AGRNL
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