Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5945 |
Symbol | |
ID | 8337307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6863290 |
End bp | 6864213 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644959049 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003116644 |
Protein GI | 256395080 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.626175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGCAGC TGAACTTGCA CCGCCTGTCG ATCTTCCTGA CCGTCGTCGA GACCGGCGGC TTCTCGGCGG CCGCGCAGAA GCTCTACATG AGCCAGCCCT CGGTCTCCAA CCACGTCCGC AACCTCGAAC AGTCGCTGCA GACAACCCTG ATAGACCGCT CCGGCCCGCG CATCCGCCCC ACCGCCGAGG GCGAAGTCCT GGCCGAGTAC GCACGCCGCA TCTTCCTCCT GACCGAGGAA GCGGTCGCAG CCATCCGCGA GGTATCCGGC GTCCAGTCCG GGCGCCTGGA AGTCGGCGGC ACGACCACGG TCGGCACGTA CCTGCTGCCA CGACTGCTCG CACGCTTCCG CGAACGGCAC CAGAACATCG AGTGCGACAT CGTCGTCGGC AACAACGGCC AGATCCTCAA GCGCCTCCTG GACGGCGAAC TCGGCCTGGC CATCGTCGCC GGCCAACCCG CAGCCCCCCA ACTGAAAACC GAAACAGTCC TCGACGAACG CCTCCTCCTA GTAGCCGCCC CCGGCCACCC CCTGACCCAC CCCACCCCCC ACATCACCGC ACCCCAGCTG GCAGGCGAAC GCTTCCTCCT GCGCGAACCC GGCTCCCAAA CCCGCGACCT CCAAGAAGCA GCCCTGATCA ACTGGGACCT CGACGACATG CCCAAAGCCG ACATGTGGGG CCCAGAAACC ATCAAGCAAT CCGTAGCAGC CGGCCTAGGC ATCTCCCTGA TCTCCGAACA CGCCATCGAC ACCGAAGTCA AAGACGGCCG CCTAGCAGTC CTCGAAGTCG ACCCACCCCT ACGCTCCCGC CCAGTAGTGA TCGCCTACCG CCGAGACCGC CTCCTATCAC CCGCCGAACG CGCTTTCGTG GCCCTGGCAC GAGGCCTGCG GACCTGGCCG GACAGCGAGG CGGCTGCGGG CTGA
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Protein sequence | MTQLNLHRLS IFLTVVETGG FSAAAQKLYM SQPSVSNHVR NLEQSLQTTL IDRSGPRIRP TAEGEVLAEY ARRIFLLTEE AVAAIREVSG VQSGRLEVGG TTTVGTYLLP RLLARFRERH QNIECDIVVG NNGQILKRLL DGELGLAIVA GQPAAPQLKT ETVLDERLLL VAAPGHPLTH PTPHITAPQL AGERFLLREP GSQTRDLQEA ALINWDLDDM PKADMWGPET IKQSVAAGLG ISLISEHAID TEVKDGRLAV LEVDPPLRSR PVVIAYRRDR LLSPAERAFV ALARGLRTWP DSEAAAG
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