Gene Caci_5943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5943 
Symbol 
ID8337305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6859468 
End bp6861510 
Gene Length2043 bp 
Protein Length680 aa 
Translation table11 
GC content75% 
IMG OID644959047 
Productserine/threonine protein kinase 
Protein accessionYP_003116642 
Protein GI256395078 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.545721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC AGACGCTTGG TGCCGGGGAC CCGCACCGGA TCGGTCCGTA CGTCCTGACC 
GGCCGGCTGG GCGCCGGCGG TATGGGCAGT GTCTACCTGG GCTGGGACCC CGCCGGGCGG
CCCGCCGCGG TGAAGGTGGT CCGCACCGAC TTCCTGCAGG ACCCCGACTT CCGGGCCCGC
TTCCGCCGCG AGATCTCCTC GGCGCGCCGG GTCAGCGGGC CGTGGATCTC CCGGGTGCTG
GACGCCGACC CGGACGCCGA ATCGCCGTGG CTGGCCACCG AATACGTCGC CGGCCCGACG
CTGGACGCCG CGGTCACCCG CTTCGGCCCG CTGCCCACCG AGACCGTCGC GGTGCTGGCG
CAGTGCCTGG GCCAGGCGCT CGCGGCCGTG CACGCGGCCG GCGTGGTGCA CCGGGACATC
AAGCCCAACA ACATCCTGCT CGCCGCCGAC GGCCCGCGCC TGATCGACTT CGGCATCGCC
CGCGCGACCG ACGACACCAA GCTCACCGCC ACCCACGCCG GCGTGCTCGG CGTGGCCGGC
TTCATCGCGC CGGAGCGCAT CGAGAGCCAG GCGATGCTCC CGGCCGGCGA CGTCTTCGCC
GGCGGCGTGG TGCTCGCCTT CGCCGCCACC GGCAAACTCG CCTTCGGCAG CGGCGAGCCG
GTCACGGTCG CCTACCGCGT GGTCCACGGC GAGCCGGACC TGAGCGAACT GCCCACCGAA
CTTCAGCCGC TGGTGACGCA GTGCCTGTCC AAGGACCCCA GCCGGCGCCC CGACGCCGCA
CGGCTCGCCG CCGAGGCCCA GCGCCTGCGC GGCGAAAGCG ACTGGCCCGG CGTCCCGGTC
ACCACGACCG ACTGGTCCGG CGGCGGCACG ACCGGCGACA CGCTCGGACT GGCCACGACC
TGGCTGCCCA AGCCGCTGGC GATGCACACC GTCCGGGACT ACGACCTGAC GGCGGCACAC
GCGGCGGCCG AGACCGCGCG CCTGGACCTG CAAGACCCCC GCTTCGGGAG CCTGGGCGGG
CAGTCCGGCG CGGGTCGGGC GGCCGTCGGC TCCGGCGGCG TCGCCGGCTA CGGCGCCGAC
ATCGGTCCCG GTCGCGACGC GGCCGCGCTC ACCGGCAACG CGCTCAACGC CGCGGGCTTC
GGCGACATGT CCGGGCGCGG CGGCGCGGGC GGCCGCGGCG GCCCGCAAGG TCCGCAAGGC
CCATACGCCC CGCGCACCCA ACGCCCCGGC GACACCGAGC AGCTACCGCC GCAGCGCAAG
AAGTCGGTAG CGCTCATCGG CGGCGCGGCC GTGCTCCTGG CCGCGATCGT CGCCGGCGGC
GTGGCGCTGG CATCCGGCGG CAGCAAAACC GGCGGCGCGA CCGCGTTGCA AGGAGACGCC
TCGAACCAGA GCTCTGCGCA AACCACGTCC GGCGGCAAGG ACGGCGGGGA CCTGTCGGCC
GGCAGCTCCA AGCCCGGCGA CTCCCTGCCG ACCTCCAACG GCGTTCCACC CGCGGGCACC
AGCGCGCCCT CGTCCAGCGG CGCATCCGCA CCGGCCCAGG GCGCCACCTC GGGCGGCCAG
GCGGCCACGT CCTCCTCGGC CGGGCACTCC TCTGTGGCAC CGCCGGCGGG CACGTCCGCG
CACACCTCGT CCGCCCCGCC TGCGTCGCAC ACCACCGCCG CGCCGCCGCC GTCGACCTCG
CACGCTCCGG CGCCCGCGCC GGTCCCGTGC GGCGGCACCT CCTCGACCCC GCAGGGTACC
GGTATCAACT GCACGTTCGA CACCGCGGGC AACGGCTCCA GCGGCGGATC GCCGGTCCTG
AACAGCGGCG GAGGCGTCGT CGGCTATCTT CCGCAGGGCA CGAACTGGGT GATCTGCCAG
GCACAGGGCC GGACCGAGAC CGAGAGCGGC GGGCAGTACT ACAACAACTG GTGGGCCTGG
ACCGAGGCAA ACGACAAGAG CTGGGGCTGG GTCAGCGCGG TGGATGGGCA CGGCGGCGCC
AACAACGGCG CGTTCGGCAG CGTCCCGCTG TGCAACGGAT CGAAGGGCTC GCCGCCGCAG
TAG
 
Protein sequence
MTMQTLGAGD PHRIGPYVLT GRLGAGGMGS VYLGWDPAGR PAAVKVVRTD FLQDPDFRAR 
FRREISSARR VSGPWISRVL DADPDAESPW LATEYVAGPT LDAAVTRFGP LPTETVAVLA
QCLGQALAAV HAAGVVHRDI KPNNILLAAD GPRLIDFGIA RATDDTKLTA THAGVLGVAG
FIAPERIESQ AMLPAGDVFA GGVVLAFAAT GKLAFGSGEP VTVAYRVVHG EPDLSELPTE
LQPLVTQCLS KDPSRRPDAA RLAAEAQRLR GESDWPGVPV TTTDWSGGGT TGDTLGLATT
WLPKPLAMHT VRDYDLTAAH AAAETARLDL QDPRFGSLGG QSGAGRAAVG SGGVAGYGAD
IGPGRDAAAL TGNALNAAGF GDMSGRGGAG GRGGPQGPQG PYAPRTQRPG DTEQLPPQRK
KSVALIGGAA VLLAAIVAGG VALASGGSKT GGATALQGDA SNQSSAQTTS GGKDGGDLSA
GSSKPGDSLP TSNGVPPAGT SAPSSSGASA PAQGATSGGQ AATSSSAGHS SVAPPAGTSA
HTSSAPPASH TTAAPPPSTS HAPAPAPVPC GGTSSTPQGT GINCTFDTAG NGSSGGSPVL
NSGGGVVGYL PQGTNWVICQ AQGRTETESG GQYYNNWWAW TEANDKSWGW VSAVDGHGGA
NNGAFGSVPL CNGSKGSPPQ