Gene Caci_5922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5922 
Symbol 
ID8337284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6833902 
End bp6834660 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content62% 
IMG OID644959026 
Producthypothetical protein 
Protein accessionYP_003116621 
Protein GI256395057 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.235163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.148012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA AGGACTACGG CATCATCGTC GCCGTCCTCA TCCTGACCTT CATCACCCTG 
CGCCTGTTCG AGCGCTTCAT TCCGCATCAT CGGCGCGAGC CGCACAATGA TGTCGCCGGG
TTCATCTTCG CCACGGTCTC TGTGGTGTTC GCGGTGCCGT TGGCGTTCGT GGTGGTGGCG
TTGTGGACGA ACAATGACAC CGCGCATCAG ACCACGTTCA AGGAGGCTAA CGAGCTCGCG
GGTATCTACT GGATCTCGCG TCAGTTGCCG GAGCCGCTGG GTCCGCAGTT GGAGCACGAG
ACGCTGGACT ACGCGCACAC GGTCATCGAT GACGAGTGGC CGTTGCTGGC CGATCATCAG
ACGAGCCCGA AGGCCACGGA GCTGGTGTAC CAGATGCGCG ACAGTGTCTT TGCCTTCAAA
CCGGCCGACA TCTCGCAGCA GACTCTCTAC GATCACGCGC TGACCCATGT CGAGTCGCTG
GCTGAGGAGC GCAGACTGCG GTTGAACCAG ACCGAGGAGT CGTTGCCGCC GCTGCTGTGG
GCGATCCTCA TCGGCAGCGC GTTGGTGACC ATTGCCTTCA CGTTCTTGTT CGGCCTGTCC
AGTTCCTTCG CGCACACCGT GATGGTGATG ACGTTGGCCG CGCTGGTCGT GGTGTCGTTG
GTGGTCGTCA GGGAGATGAG TTACCCGTAT TCGGGGACGA TGAAGGTCCA TCCGACGGCG
TTCGAGGTGT TCCTGTCACG GCTGCCGGCG CCTCGCTGA
 
Protein sequence
MTAKDYGIIV AVLILTFITL RLFERFIPHH RREPHNDVAG FIFATVSVVF AVPLAFVVVA 
LWTNNDTAHQ TTFKEANELA GIYWISRQLP EPLGPQLEHE TLDYAHTVID DEWPLLADHQ
TSPKATELVY QMRDSVFAFK PADISQQTLY DHALTHVESL AEERRLRLNQ TEESLPPLLW
AILIGSALVT IAFTFLFGLS SSFAHTVMVM TLAALVVVSL VVVREMSYPY SGTMKVHPTA
FEVFLSRLPA PR