Gene Caci_5873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5873 
Symbol 
ID8337234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6780716 
End bp6781222 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content69% 
IMG OID644958977 
Producthypothetical protein 
Protein accessionYP_003116572 
Protein GI256395008 
COG category[S] Function unknown 
COG ID[COG3236] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02464] conserved hypothetical protein, ribA/ribD-fused 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.133238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGTGA AGTATTTGTT CTTCTGGGGA CACACGCCGA ACAGGCCCGG GACGGTCGGC 
GCGGAGTGCC TGAGCCAGTG GTACCCGGCG CCGTTCGAAG TGGACGGCCT CCGCTTCGCC
ACCGCAGAGC ACTCCATGAT GTGGGGCAAG GCGCAGCTGT TCGGGGACGA GCAGGCGGCG
GCGCGGATCG TGGCTGCCGG GCACCCCAAA GAGGCGAAGG ACCTCGGGCG GACGATCAGG
AAGTTCGACG AGGACACCTG GGTCGCCGAA CGGGTGGCGA TCGTGACGGC GGGCAACGTG
GAGAAGTTCC GGCAGAACCC GGACTTGCTC GCCTTCCTGC TCACGACCGG GGAGCGCGTG
CTGGTCGAGG CCAGCCCGAT GGACCGGATC TGGGGCATCG GGCTGGCCTC GGACGACGAG
CGGGCCCAGG ATCCGGCGCG CTGGCGCGGG CTGAACCTGC TCGGGGAGGC GCTGATGGCG
GCTCGGAAGA CATTGCGGGG CGAGTGA
 
Protein sequence
MTVKYLFFWG HTPNRPGTVG AECLSQWYPA PFEVDGLRFA TAEHSMMWGK AQLFGDEQAA 
ARIVAAGHPK EAKDLGRTIR KFDEDTWVAE RVAIVTAGNV EKFRQNPDLL AFLLTTGERV
LVEASPMDRI WGIGLASDDE RAQDPARWRG LNLLGEALMA ARKTLRGE