Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5774 |
Symbol | |
ID | 8337135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6673328 |
End bp | 6674128 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958878 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003116473 |
Protein GI | 256394909 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.798057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTC ACCTGCAGGG AAAGCGCGCA CTGATCACCG GCTCGAGCTC TGGGCTCGGG GAGGCCACGG CCAGGATGTT GGCGGCTGAG GGGGCGGCCG TCGTCATCCA TGGGCGGAAC GGGGGGCGCG CGGAGGCGGT CGCGGCTGCC ATCCGCGAGG GCGGCGGGGT GGCGACCGTC GCGCTCGGCG ACCTGGCCAC CGACGAGGGA GCTGCCGAGG TCGCTCGGCA GGCGAGTGCC GACGGGCCTG TCGACATCCT GGTGAACAAC GCCGGGTTCT ATCGGCATCT GTCGTGGGCC GAGGCGTCGC CGGCCGAGTG GAGCGAGACG TACAACGTCA ACGTCGTCTC GGGGGTGCGG ATGATTCAGC ACCTGGTTCC GGCGATGCGG GAGCGCGGGT GGGGGCGGGT CGTCACCATC GGCGGCGGGC TGGCCTCCCA GCCGATGAAC ACCCACCCGC AGTACAACGC CACGCTCGCG GCGCGCCACA ACCTCGCGGT GTCGCTGGCT CGCGAGCTCA AGGGCACCGG TGTGACCTCG AACGTGGTCT CGCCCGGCGC CATCCTGGTC GAGGCGACCA AGGAGCTCGT GACGCAGATC GGCCCGGCGC GCGGCTGGGG CGAGACGTGG GAGGAGATCC AGCCGAACGC GGTCCGGGCG CTCATTCCGA ACGACCGGGA GCGGTTCGGC GAGCCGGACG AGATCGCGGC GGCGGTGGCG TATCTGTGCG GCCCGCATGC CGCCTATGTC AGTGGCGCGA CGATCCGCGT CGACGGCGGG CTGATCCGCT CGGCGTTCTG A
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Protein sequence | MNLHLQGKRA LITGSSSGLG EATARMLAAE GAAVVIHGRN GGRAEAVAAA IREGGGVATV ALGDLATDEG AAEVARQASA DGPVDILVNN AGFYRHLSWA EASPAEWSET YNVNVVSGVR MIQHLVPAMR ERGWGRVVTI GGGLASQPMN THPQYNATLA ARHNLAVSLA RELKGTGVTS NVVSPGAILV EATKELVTQI GPARGWGETW EEIQPNAVRA LIPNDRERFG EPDEIAAAVA YLCGPHAAYV SGATIRVDGG LIRSAF
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