Gene Caci_5745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5745 
Symbol 
ID8337106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6626377 
End bp6627261 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content70% 
IMG OID644958849 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_003116444 
Protein GI256394880 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.321792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTGC TGACCGTCTC CACCGTCAAT GTCAACGGCA TCCGCGCCGC CGCCGCCAAG 
GGCTTCACCG AGTGGCTGAA GGCCACCCCC GCCGACGTCG TGTGCCTCCA GGAGGTCCGC
GCCGAACCGG ACCAGTTCCC GGCCGACCTG CGCGCCCCCG AAGGCTGGCA CACCCTCGTC
GCCCCCGCGG CGGCCAAAGG CCGCGCCGGC GTGGCCCTGT TCAGCCGCGT CGCCCCCACC
ACCACCCGCA TCGGCTTCGG CACCCCCGAA TTCGACACCG CCGGCCGCTA CGCCGAGATG
CACCTCCCCA CCCTCACGAT CGCCAGCCTC TACCTCCCCA CCGGCGAGGT AGGCACCGAA
CGCCAGGCGG AGAAGGAACG CTTCATGGCA GGCTTCCACG CCCACCTGAG CGCCCTGAGC
ACCGAAGCAG CCCAAACCGG CCGAGCCATC CTCATCTGCG GCGACTGGAA CATCGCCCAC
GACAAGGCCG ACATCAAGAA CTGGCGAGCC AACCAAAAAA GCTCCGGCTT CCTCCCCGAA
GAACGCCAAT GGCTCACCAG CGTCCTGACC GAGGCCGGCT ACGCCGACGT GGTCCGCAAC
CTCCACCCCG GCGTCGACGG CCCGTACTCC TGGTGGAGCT TCCGCGGCAA AGCCTTCGAC
AACGACACCG GCTGGCGCAT CGACTACCAG ATGGCCTCCG CGAACCTCGC CGCCCTCGCC
ACCTCCGCGA AGGTGGAACG CGCAGCGACG TACGCGGAGC GCTGGTCCGA CCACGCCCCG
GTGACCTGTG CGTACGACTG GGATCTCGCG GCCGTGCCCG CACCGCGCAG CCCGATCAGC
ATCGTCGGCA CCGAGCTGCT GGAAGACTCG GCAGCGGCCT CTTAG
 
Protein sequence
MRVLTVSTVN VNGIRAAAAK GFTEWLKATP ADVVCLQEVR AEPDQFPADL RAPEGWHTLV 
APAAAKGRAG VALFSRVAPT TTRIGFGTPE FDTAGRYAEM HLPTLTIASL YLPTGEVGTE
RQAEKERFMA GFHAHLSALS TEAAQTGRAI LICGDWNIAH DKADIKNWRA NQKSSGFLPE
ERQWLTSVLT EAGYADVVRN LHPGVDGPYS WWSFRGKAFD NDTGWRIDYQ MASANLAALA
TSAKVERAAT YAERWSDHAP VTCAYDWDLA AVPAPRSPIS IVGTELLEDS AAAS