Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5723 |
Symbol | |
ID | 8337084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6605197 |
End bp | 6605985 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644958827 |
Product | imidazoleglycerol phosphate synthase, cyclase subunit |
Protein accession | YP_003116422 |
Protein GI | 256394858 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCG CCGCCCTCGG CCGGCTGGCC GTCCGCGTCA TCCCGTGCCT GGACGTCGAC GCCGGACGCG TGGTGAAGGG TGTGAACTTC GAGAACCTGC GCGACGCCGG CGATCCGGTG GAGCTGGCGC GCGCCTACGA CGCCGCGGGC GCCGACGAGC TGACGTTCCT GGACGTCACC GCCTCCTCCG ACGCCCGCGC CACGGTCTAC GAAGTGGTCG GGCGCACCGC GGACCAGGTG TTCATCCCGC TGACGGTCGG CGGCGGCGTG CGCACGGTCC AGGACGTGGA CCGCCTGCTG CGCGCCGGCG CGGACAAGGT CGGGGTCAAC ACCGCCGCGG TGACCCGCCC GGAGCTGATC GCCGAGATCG CCGACCGCTT CGGCAACCAG GTGCTGGTCC TGTCGGTGGA CGCCCGGCGC TGCCCGGAGG GCGTGGGCAC CGACTCCGGC TTCGAGGTCA CCACGCACGG CGGCCGCCGC TCGACCGGCG TCGACGCGGT GGCCTGGGCG GCGCGCGCCG CGGAGCTCGG CGCGGGGGAG ATCCTGCTGA ACTCGATCGA CGCCGACGGG ATGAAGCAGG GCTTCGACCT GGAGATGCTG GCGGCGGTGC GGGCCGCGGT GACGGTTCCG CTGATCGCCT CCGGCGGCGC CGGCGCGACC GAGCACTTCG CCCCGGCGGT CGGCGCGGGC GCGGACGCGG TGCTGGCGGC CTCGGTGTTC CACTTCGGGG ACGTGACGAT CGGCGAGGTG AAGGATTCGC TGCGGGGCGC CGGGTATCCG GTGCGCTAG
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Protein sequence | MSTAALGRLA VRVIPCLDVD AGRVVKGVNF ENLRDAGDPV ELARAYDAAG ADELTFLDVT ASSDARATVY EVVGRTADQV FIPLTVGGGV RTVQDVDRLL RAGADKVGVN TAAVTRPELI AEIADRFGNQ VLVLSVDARR CPEGVGTDSG FEVTTHGGRR STGVDAVAWA ARAAELGAGE ILLNSIDADG MKQGFDLEML AAVRAAVTVP LIASGGAGAT EHFAPAVGAG ADAVLAASVF HFGDVTIGEV KDSLRGAGYP VR
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