Gene Caci_5723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5723 
Symbol 
ID8337084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6605197 
End bp6605985 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content75% 
IMG OID644958827 
Productimidazoleglycerol phosphate synthase, cyclase subunit 
Protein accessionYP_003116422 
Protein GI256394858 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0107] Imidazoleglycerol-phosphate synthase 
TIGRFAM ID[TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCG CCGCCCTCGG CCGGCTGGCC GTCCGCGTCA TCCCGTGCCT GGACGTCGAC 
GCCGGACGCG TGGTGAAGGG TGTGAACTTC GAGAACCTGC GCGACGCCGG CGATCCGGTG
GAGCTGGCGC GCGCCTACGA CGCCGCGGGC GCCGACGAGC TGACGTTCCT GGACGTCACC
GCCTCCTCCG ACGCCCGCGC CACGGTCTAC GAAGTGGTCG GGCGCACCGC GGACCAGGTG
TTCATCCCGC TGACGGTCGG CGGCGGCGTG CGCACGGTCC AGGACGTGGA CCGCCTGCTG
CGCGCCGGCG CGGACAAGGT CGGGGTCAAC ACCGCCGCGG TGACCCGCCC GGAGCTGATC
GCCGAGATCG CCGACCGCTT CGGCAACCAG GTGCTGGTCC TGTCGGTGGA CGCCCGGCGC
TGCCCGGAGG GCGTGGGCAC CGACTCCGGC TTCGAGGTCA CCACGCACGG CGGCCGCCGC
TCGACCGGCG TCGACGCGGT GGCCTGGGCG GCGCGCGCCG CGGAGCTCGG CGCGGGGGAG
ATCCTGCTGA ACTCGATCGA CGCCGACGGG ATGAAGCAGG GCTTCGACCT GGAGATGCTG
GCGGCGGTGC GGGCCGCGGT GACGGTTCCG CTGATCGCCT CCGGCGGCGC CGGCGCGACC
GAGCACTTCG CCCCGGCGGT CGGCGCGGGC GCGGACGCGG TGCTGGCGGC CTCGGTGTTC
CACTTCGGGG ACGTGACGAT CGGCGAGGTG AAGGATTCGC TGCGGGGCGC CGGGTATCCG
GTGCGCTAG
 
Protein sequence
MSTAALGRLA VRVIPCLDVD AGRVVKGVNF ENLRDAGDPV ELARAYDAAG ADELTFLDVT 
ASSDARATVY EVVGRTADQV FIPLTVGGGV RTVQDVDRLL RAGADKVGVN TAAVTRPELI
AEIADRFGNQ VLVLSVDARR CPEGVGTDSG FEVTTHGGRR STGVDAVAWA ARAAELGAGE
ILLNSIDADG MKQGFDLEML AAVRAAVTVP LIASGGAGAT EHFAPAVGAG ADAVLAASVF
HFGDVTIGEV KDSLRGAGYP VR