| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5722 |
|---|
| Symbol | |
|---|
| ID | 8337083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 6604105 |
|---|
| End bp | 6605067 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644958826 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003116421 |
|---|
| Protein GI | 256394857 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGAGG CACGCAGCCT GACTAAACGC TACGGCGACA AGACCGCCGT CTCCGACTTG
TCCTTCACCG TGCGCCCCGG GGTGGTGACC GGCTTCCTGG GACCGAACGG CGCCGGCAAA
TCCACCACGA TGCGCATGAT CCTGGGCCTG GACCGGCCGA GCTCCGGCTC GGTGACCGTC
AACGGCAAGG CCTACGCCGA GCACTCCGCG CCGCTGCACG AGGTGGGCGC GCTGCTGGAG
GCCAAGGCCA TCCACACCGG GCGCACCGCC TACAACCACC TGCTCGCGCT GGCCGCGACC
ACCGGGATCG AGCGCTCGCG GGTCGACGAG GTCATCGACC TGGTGGGTCT GCGCGAGGTC
GCCAAGAAGC GCGCCGGCGG GTTCTCCCTG GGCATGGGGC AGCGGCTGGG CATCGCCAGC
GCGCTGCTGG GCGACCCGGA CACGCTGATC CTGGACGAGC CGGTGAACGG GCTGGACCCC
GAGGGCATCC TGTGGATCCG GAACCTGCTC AAGCACCTGG CCTCCGAGGA CCGGACGATC
TTCGTCTCCA GCCACCTGAT GTCCGAGATG GCGCTCACCG CCGAGCACCT GATCGTGATC
GGGCAGGGCA AGCTCATCGC CGACACCTCG GTGGCCGAGT TCATCTCGCG CGCCTCCACC
GGCAGCGTCA AGGTCCGCAC GCCCGACGCC GCCCGGCTTC GCGAGCTGCT GGCCGGTCCG
GACGTCACCG TTTCCTCCTC GGACGAGGGC ACGCTGCAGG TCCAGGGCCT GACCAGCGAC
CGGATCGGCA CCATCGCCGC GGAGAACCGG ATCACGCTGT TCGAGCTGGC GCCGCACGAG
GCCTCGCTGG AGGAGGCGTT CATGGAGCTC ACCGGCGACG CCGTGGAGTA CCGCGCGCCG
GCGCAGAAGA CCGCCGGCGC TACCGGCGCC GCCAGCACCA CCGACGTCGA GGTGAACGCA
TGA
|
|---|
| Protein sequence | MIEARSLTKR YGDKTAVSDL SFTVRPGVVT GFLGPNGAGK STTMRMILGL DRPSSGSVTV
NGKAYAEHSA PLHEVGALLE AKAIHTGRTA YNHLLALAAT TGIERSRVDE VIDLVGLREV
AKKRAGGFSL GMGQRLGIAS ALLGDPDTLI LDEPVNGLDP EGILWIRNLL KHLASEDRTI
FVSSHLMSEM ALTAEHLIVI GQGKLIADTS VAEFISRAST GSVKVRTPDA ARLRELLAGP
DVTVSSSDEG TLQVQGLTSD RIGTIAAENR ITLFELAPHE ASLEEAFMEL TGDAVEYRAP
AQKTAGATGA ASTTDVEVNA
|
|---|
| |