Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5701 |
Symbol | gltD |
ID | 8337062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6576953 |
End bp | 6578413 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644958805 |
Product | glutamate synthase subunit beta |
Protein accession | YP_003116400 |
Protein GI | 256394836 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGACC CCCGTGGTTT CCTGACCACC CCCCAGCAGC ACCCGGAGCG CCGCCCGGTC GCCGAGCGCG TCCAGGACTG GAAAGAGGTC TACAAGCCCG GGGCGCTGCT GCCGATCATC AACAAGCAGG CCGGCCGCTG CATGGACTGC GGGATCCCGT TCTGCCACAA CGGCTGCCCG CTGGGCAACA TCATCCCGGA GTGGAACGAC CTGGTCTGGA AGGGCGACTG GGAGGGAGCC TCCGACCGGC TGCACGCGAC CAACAACTTC CCGGAGTTCA CCGGGCGGCT GTGCCCGGCG CCGTGCGAGA CCGCGTGCGT GCTGGGGATC AACCAGCCGG CGGTGACCAT CAAGAACGTC GAGGTCTCCA TCATCGACCG GGCGTGGGAG GACGGGACCG TCAGGCCTCT GCCGCCCGAG CGCCTGTCCG GCCGCACGGT CGCGGTGATC GGCTCCGGTC CCGCCGGGCT GGCCGCCGCG CAGCAGCTCA CGCGCGCCGG GCACACCGTC GCGGTCTACG AGCGCGCCGA CCGGATCGGC GGGCTGCTGC GCTACGGCAT CCCCGAGTTC AAGATGGAGA AGCGCCACCT GAACCGGCGG ATCGAGCAGA TGCGCGCCGA GGGCACCAAG TTCCGTCCCG GCATGCACAT CGGAGTGGAC CTCACCGGAG ACGCGCTCCT GGCGCGCTAC GACGCCATCG TGCTCGCGGT CGGCTCGACC AAGGCCCGGG AGCTGGACGT GCCCGGCCGC GACCTGGCCG GCGTGCACCA GGCGATGGAC TACCTGCCGT ACGCGAACAA GACCTGCGAG GGCGACTACC TGACCGCGCC GATCGACGCG TTCGGCAAGC ACGTCGTGGT CATCGGCGGC GGCGACACCG GGGCGGACTG CCTGGGCACC GCCACGCGTC AGGGTGCTGA GTCGGTCACC CAGCTGGAGA TCATGCCCCA GCCGACCGGC GACCGCCCGG CGAACCAGCC GTGGCCGACC TACCCGATGA TCTTCCGCGT CTCCTCGGCG CACGAGGAGA ACGGCGACCG CGTCTACGCG GTGTCCACCA CCGAGTTCGT GGGCGACGAC AACGGCCGGG TCAAGGCCCT GCGCCTGGTC GAGGTCCGGT TCGAGGGCGG GCGCCCGGTC CCGGTGGCCG GCACCGAGCG GGAGATCCCG GCCGACCTGG TGCTGCTGGC GATGGGCTTC GTCGGCCCGG AGCGCGGCAA CGGCCTGATC GACCAGCTGG GCCTGGCCCT GGACGAGCGC GGCAACATCG CGCGCGACGG GGAGTACGCC ACCAACGTGC CGGGCGTGTT CGTGGCCGGC GACGCCGGGC GCGGACAGTC GCTGATCGTC TGGGCGATCG CCGAGGGCCG CTCGGCGGCC AGCTCGGTGG ACGCCTACCT GGCCGGCTCG ACCACGCTGC CCAAGCCGAT CCCGCCGACG GCGCGGCCGG TGACGGTGTG A
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Protein sequence | MADPRGFLTT PQQHPERRPV AERVQDWKEV YKPGALLPII NKQAGRCMDC GIPFCHNGCP LGNIIPEWND LVWKGDWEGA SDRLHATNNF PEFTGRLCPA PCETACVLGI NQPAVTIKNV EVSIIDRAWE DGTVRPLPPE RLSGRTVAVI GSGPAGLAAA QQLTRAGHTV AVYERADRIG GLLRYGIPEF KMEKRHLNRR IEQMRAEGTK FRPGMHIGVD LTGDALLARY DAIVLAVGST KARELDVPGR DLAGVHQAMD YLPYANKTCE GDYLTAPIDA FGKHVVVIGG GDTGADCLGT ATRQGAESVT QLEIMPQPTG DRPANQPWPT YPMIFRVSSA HEENGDRVYA VSTTEFVGDD NGRVKALRLV EVRFEGGRPV PVAGTEREIP ADLVLLAMGF VGPERGNGLI DQLGLALDER GNIARDGEYA TNVPGVFVAG DAGRGQSLIV WAIAEGRSAA SSVDAYLAGS TTLPKPIPPT ARPVTV
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