Gene Caci_5647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_5647 
Symbol 
ID8337007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp6508028 
End bp6508801 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content71% 
IMG OID644958751 
Producthypothetical protein 
Protein accessionYP_003116347 
Protein GI256394783 
COG category[R] General function prediction only 
COG ID[COG4821] Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.193536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.200445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCCC TGCCGCCGGA GCTGTCGCCG ACCGGATACC TCGCCGAGGT CCGCCGGGTG 
CTGGAGCACG TCGAGAAAAC CCAGCTGGAC GGGGTCCTGG CCGCCGGAGC GCTGATCGCG
GACTCGATCG CGGCCGAGGG CGTCCTGCAG GCCTTCGGGA CCGGGCACTC CGAGGCGCTG
GCGATGGAGC TGGCCGGGCG CGCCGGCGGG TTCGTCCCCA GCAACAAGCT GGCGCTGCGG
GACCTGATCC TGTTCGGCGG GGAGCCGGTG GACTTCCTCA ACGACCCCAA GATCGAGCGC
CGGGAAGGGC TGGCGAAGCG GATCTACGAG CTGGCGCCGG TGGAGCCGCA GGACGTGTTC
GTGATCGCCT CCAACTCCGG CGGCAACGGC GTGATCGTGG ACCTGGCCGA GCACGTCACC
TCCCTGGGCC ACAAGCTCAT CGCCATCACC TCCTTGGAGC ACACCGCGCG CATCACCTCG
CGCCACTCCT CGGGCAAGCG GCTCAAGGAC TTCGCAGACG TCGTGCTGGA CAACGGCGCG
CCGTACGGGG ACTCGGTGCT GCCGCTGCCG TCGCTGGGGG CGAACGTCTG CGGGGTCTCC
TCGGTCGGCA ACACGGTCCT GGCGCAGGCC ACGATCGCCG AGGCGGTGCG GCTGCTGGCC
GAGCAGGGCC TGACGCCGCC GGTCTACCTG TCCGCGAACG CCATCGGCGG CGATGCCCAC
AACGACGTGC TGGAGGCAAG ATACGCCGGG CGGATCCGCC GCGCCGCGTC CTGA
 
Protein sequence
MESLPPELSP TGYLAEVRRV LEHVEKTQLD GVLAAGALIA DSIAAEGVLQ AFGTGHSEAL 
AMELAGRAGG FVPSNKLALR DLILFGGEPV DFLNDPKIER REGLAKRIYE LAPVEPQDVF
VIASNSGGNG VIVDLAEHVT SLGHKLIAIT SLEHTARITS RHSSGKRLKD FADVVLDNGA
PYGDSVLPLP SLGANVCGVS SVGNTVLAQA TIAEAVRLLA EQGLTPPVYL SANAIGGDAH
NDVLEARYAG RIRRAAS