Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5645 |
Symbol | |
ID | 8337005 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6505947 |
End bp | 6506471 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644958749 |
Product | large conductance mechanosensitive channel protein |
Protein accession | YP_003116345 |
Protein GI | 256394781 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1970] Large-conductance mechanosensitive channel |
TIGRFAM ID | [TIGR00220] large conductance mechanosensitive channel protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0366128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.120344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGGCT TCGTGAAGTT CGTCGTGCGG GGCAACGTCA TCGGGCTGGC CGTCGGCGTC GTCATCGGCG CGGCGTTCGC TGCGATGGTC ACCTCCTTCA CCACCGCGTT CCTCACACCG CTGATCGGCT GGGCGACCGG CGGCATCGGG GACTACAGCA AGAAGGTCTT CACGCTCGGC AAGACCCCGT TCCCCTACGG GACGTTCGTC AACGCCGGGA TCAGCTTCCT ACTCACCGCC GCGACGCTGT ACTTCCTGAT CGTGCTGCCG GTCAACAAGC TCACCGAGGA GCTGAACCCG CACCACGACC TGTCCCACGC CAAGCGCTCC TGCCCGGAAT GCCTGCAGCA GATCCCCGCG CGGGCCCGCC GATGCAGCTA CTGCACCTCG ACCGTCGCCC CGATCCTCGA CGAGGACTCC CCGGACCTCA CCGACGAACT CCCCGGCGAG ATCGCGCTGC GCAGCGCGCT GCCGGAGATG AGGTTCGGGG AGCCGGCCGC AGCGGCTGAA GCCAAGCCAG TCTGA
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Protein sequence | MNGFVKFVVR GNVIGLAVGV VIGAAFAAMV TSFTTAFLTP LIGWATGGIG DYSKKVFTLG KTPFPYGTFV NAGISFLLTA ATLYFLIVLP VNKLTEELNP HHDLSHAKRS CPECLQQIPA RARRCSYCTS TVAPILDEDS PDLTDELPGE IALRSALPEM RFGEPAAAAE AKPV
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