Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5616 |
Symbol | uvrA |
ID | 8336976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6472997 |
End bp | 6476155 |
Gene Length | 3159 bp |
Protein Length | 1052 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644958720 |
Product | excinuclease ABC subunit A |
Protein accession | YP_003116316 |
Protein GI | 256394752 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.239226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATCGGC TGATCGTCCG CGGCGCGCGG GAGCACAACC TCAAGGACGT CTCGGTAGAC CTCCCCCGGG ACGCCCTTAT CGTGTTCACC GGCTTGTCCG GCTCGGGCAA GTCCTCGCTG GCGTTCGACA CGATCTTCGC TGAGGGCCAG CGGCGATACG TGGAGTCGCT GTCGGCGTAC GCCCGCCAGT TCCTCGGGCA GATGGACAAG CCCGACGTCG ACTTCATCGA GGGGTTGTCC CCTGCGGTGT CGATCGACCA GAAGTCCACC TCGAAGAACC CGCGGTCGAC CGTGGGGACC ATCACCGAGG TGTACGACTA CCTGCGCCTG CTCTACGCGC GCGCCGGCCG TCCGCACTGC CCGGTCTGCG GGCGCCCGAT CGCCCGGCAG AGCCCGCAGC AGATCGTGGA CCGCGTCCTG GAGCTGGAGG AGGGCACCCG CTTCCAGGTC CTGGCGCCGG TGGTCCGCGA GCGCAAGGGC GAGTACGTCG ACCTGTTCGG CGAGCTGCAG GCCAAGGGCT TCAGCCGGGC CCGCGTCGAC GGCGTGGTGG TGCAGCTGAC CGAGGCGCCG ACGCTGAAGA AGCAGGAGAA GCACACCATC GAGGTGGTGG TGGACCGGCT CTCGGTCAAG GCCAGCGCGA AGCGCCGGCT GACCGACTCG GTGGAGACCG CGCTGCAGCT CGGCGGCGGC ATGATCACGC TGGAGTTCGT CGACCTCGCC GAGGACGACC CGAACCGCGA GCGCATGTAC TCCGAGCACC TGTACTGCGT CTACGACGAC CTGTCCTTCG AGGAGCTCGA GCCGCGCTCG TTCTCCTTCA ACTCCCCCTT CGGCGCCTGC CCGACCTGCT CGGGCCTGGG CGTGAAGCTG GAGGTGGACA CCGAGCTGGT GATCCCGGAC CCGGACAAGA GCCTGGCCGA AGGCGCGGTC ACGGTCTGGG GCAACCCCTC CATGGGCTCG CAGTGGTTCG GCCACGTGCT CACCTCGCTC GGCCAGGAGA TCGGCTTCAC CATGGACACG CCGTGGGGGC GGATCCCGGC GAAGGCCCAG AAGGTCGTCC TCGAGGGCTA CAAGAAGAAG ATCACGGTCC GCTACACCAA CCGGCACGGC TCCAAGCGCG CGTGGGAGAC CACCTACGAG GGCGTCAAGC CCTGGATCAC CCGGCGCTAC GCCGAGTCCG ACAGCGACAG CGCGCGCGAG CGCCTGGCCG GCTACATGCG CGAGGTCCCG TGCGAGGCCT GTGACGGCAC CCGCCTCAAG CCGGTCATCC GCGCCGTCAC CCTCGGCGGC GAGCGCTCCG AGGGCGGCCG CTCGATCGAC GAGATCGCGG CGCTGCCGGT GGGGGAGTGC GCGCAGTATC TGCGGGAGCT GACCCTCACC GACCGCGAGG CGCAGATCGC CGCGCGGGTG CTCAAGGAGG TCAACGAGCG CCTGCAGTTC CTGGTCGACG TCGGGCTGGA CTACCTCTCG CTGGACCGCG CCAGCGCCAC CCTGGCGGGA GGTGAGGCCC AGCGCATCCG GCTGGCCACG CAGATCGGCT CGGGCCTGAC CGGCGTGCTG TACGTGCTCG ACGAGCCCTC CATCGGGCTG CACCAGCGCG ACAACCACCG GCTGATCGAG ACCCTGATCC GGCTGCGCGA CCTGGGCAAC ACCCTGATCG TGGTGGAGCA CGACGAGGAC ACCATCGCCA TCGCCGACTG GGTCGTGGAC ATCGGCCCGG GCGCCGGCGA GCACGGCGGG CAGGTCGTGG TCTCCGGGAC CGTGGAGGAC CTGCTGGCCT CCGAGGACTC CCTGACCGGC CAGTACGTCT CCGGGCGGCG CCGGATCGAG ATCCCGGCGA TGCGCCGGCC GATCGACAAG AAGCGGCAGC TGGTGGTGCG CGGCGCGCGG GAGAACAACC TGCGCGACAT CGACGTCGCC TTCCCGCTCG GCGTCTTCGT CGCGGTCACC GGCGTGTCCG GCTCGGGCAA GTCCACCCTG GTCAACGACA TCCTGTACTC CACGCTGGCC CGCGAGCTCA ACGGCGCGCG CACCGTGCCC GGCCGGCACA CCCGGGTGGA CGGCGTGGAC CTGCTGGACA AGGTCGTGCA CGTCGACCAG TCGCCGATCG GCCGCACCCC GCGCTCCAAC CCGGCCACCT ACACCGGCGT GTTCGACCAC ATCCGCAAGC TGTTCGCGAA CACCACCGAG GCCAAAGTCC GCGGCTACCA GCCGGGCCGG TTCTCCTTCA ACGTCAAGGG CGGGCGCTGC GAGAACTGCC AGGGCGACGG CACGATCAAG ATCGAGATGA ACTTCCTCCC TGACGTGTAC GTGCCCTGCG AGGTCTGCCA CGGCGCGCGC TACAACCGGG AGACCCTGGA GGTCCACTTC AAGGGCAAGA ACATCGGCGA GGTCCTGGAC ATGCCGATCG AGGAGGCCGC GGAGTTCTTC GAGGCCGTCC CGGCGATCTC CCGGCACATG CAGACCCTCG TCGACGTCGG CCTGGGCTAC GTGCGCCTGG GGCAGTCGGC GACGACGCTG TCCGGCGGCG AGGCGCAGCG CGTGAAGCTG GCCGCCGAGC TCAAGCGCCG GGCCACCGGC CGCACGGTCT ACGTGTTGGA CGAGCCGACC ACCGGCCTGC ACTTCGAGGA CATCAACAAG CTCCTCGGGG TCCTGCAGCG GCTGGTGGAC CAGGGCAACT CGGTGATCGT GATCGAGCAC AACCTGGACG TCATCAAGAC CGCCGACTGG CTGGTCGACA TGGGTCCGGA GGGTGGGCGC GGCGGCGGCA TCGTGGTCGC CGAGGGCACG CCGGAGGACG TGGCGAAGGT CGCGGACAGC CACACCGGCC GCTTCCTGGA GCCGATCCTG CACGGCGAGG CGAACGCCGC GACCGCCGCG CTGACCGCGG CGCAGGCGCG CAAGCCGAAG GTCGCCAAGG CGATCGAGGC GGCGAAGCGG AGCAACGCGC CGAAGGCCGC GGCGGCCGCG AGCGCCGGCG CGGCAGCGAA GAAGAAGACG GCGGCCGGCC GGACACCGGC GGCCAAGACG GCGGCGGCGT CGAACGCGAA GGCTCCGGCG GCGGCCAAGT CGGTGGCCAA GACAGCAGTA GCCAAGACAG TGGCCAAGTC GGCGGCCGCC AAGAAGGTGC CGGCCAAGAA GGCCGCAGCG AAGAAGTAG
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Protein sequence | MDRLIVRGAR EHNLKDVSVD LPRDALIVFT GLSGSGKSSL AFDTIFAEGQ RRYVESLSAY ARQFLGQMDK PDVDFIEGLS PAVSIDQKST SKNPRSTVGT ITEVYDYLRL LYARAGRPHC PVCGRPIARQ SPQQIVDRVL ELEEGTRFQV LAPVVRERKG EYVDLFGELQ AKGFSRARVD GVVVQLTEAP TLKKQEKHTI EVVVDRLSVK ASAKRRLTDS VETALQLGGG MITLEFVDLA EDDPNRERMY SEHLYCVYDD LSFEELEPRS FSFNSPFGAC PTCSGLGVKL EVDTELVIPD PDKSLAEGAV TVWGNPSMGS QWFGHVLTSL GQEIGFTMDT PWGRIPAKAQ KVVLEGYKKK ITVRYTNRHG SKRAWETTYE GVKPWITRRY AESDSDSARE RLAGYMREVP CEACDGTRLK PVIRAVTLGG ERSEGGRSID EIAALPVGEC AQYLRELTLT DREAQIAARV LKEVNERLQF LVDVGLDYLS LDRASATLAG GEAQRIRLAT QIGSGLTGVL YVLDEPSIGL HQRDNHRLIE TLIRLRDLGN TLIVVEHDED TIAIADWVVD IGPGAGEHGG QVVVSGTVED LLASEDSLTG QYVSGRRRIE IPAMRRPIDK KRQLVVRGAR ENNLRDIDVA FPLGVFVAVT GVSGSGKSTL VNDILYSTLA RELNGARTVP GRHTRVDGVD LLDKVVHVDQ SPIGRTPRSN PATYTGVFDH IRKLFANTTE AKVRGYQPGR FSFNVKGGRC ENCQGDGTIK IEMNFLPDVY VPCEVCHGAR YNRETLEVHF KGKNIGEVLD MPIEEAAEFF EAVPAISRHM QTLVDVGLGY VRLGQSATTL SGGEAQRVKL AAELKRRATG RTVYVLDEPT TGLHFEDINK LLGVLQRLVD QGNSVIVIEH NLDVIKTADW LVDMGPEGGR GGGIVVAEGT PEDVAKVADS HTGRFLEPIL HGEANAATAA LTAAQARKPK VAKAIEAAKR SNAPKAAAAA SAGAAAKKKT AAGRTPAAKT AAASNAKAPA AAKSVAKTAV AKTVAKSAAA KKVPAKKAAA KK
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