| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5613 |
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| Symbol | |
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| ID | 8336973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 6469488 |
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| End bp | 6471479 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958717 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003116313 |
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| Protein GI | 256394749 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.143768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.363977 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGACC CGGCAACCTA TCGCCCGAAA CCCGGCGAGA TCCCGACCTC GCCCGGCGTC
TATAAATTCC GTGACCCGCA CAGCCGGGTG ATCTACGTCG GCAAGGCCAA GAACCTCCGC
TCGCGCCTGA CCAGTTACTT CCAGGACCTG GCGAACCTGC ACGTCCGCAC CCAGACCATG
GTCACCACCG CGGCCAGCGT GGAGTGGACC ACCGTGGCCA CCGAGGTCGA GGCGCTGCAG
CTGGAGTACA CCTGGATCAA GCAGTTCGAG CCGCGCTTCA ACGTCAAATA CCGGGACGAC
AAGTCCTACC CCTCCCTGGC CGTCACGGTC GGCGAGGAGT TCCCGCGCGC GCAGGTCATG
CGCGGTCCCA AGCGGCCCGG CGTGCGCTAC TTCGGCCCGT ACTCCCACGC CTGGGCGATC
CGGGAGACGC TGGACTCGCT GCTGCGCGTC TTCCCGATCC GGACCTGCTC CTCCGGGGTG
TTCAAGCGCG CCGCGCAGAC CGGGCGGCCG TGCCTGCTGG GCTACATCGG CAAGTGCTCC
GCGCCGTGTG TGGGCCGGGT CAGCGCCGAG GAGCACCGGG AGATCGTGGA CGACTTCGTG
TCCTTCATGG CCGGGCGCAC AGACCGCTAC ATCAGGGGTC TGGAAGAGGA GATGAAGGAG
GCTGCCAAGG AGCTGGAGTT CGAGAAGGCG GCCCGCCTGC GCGACGATCT CCAAGCCCTG
AAACAGAGCC TGGAGAAGAA CGCTGTCGTA CTCGGCGACG GGACCGACGC CGACGTCATC
GCGCTGTCCG AGGACCCGCT GGAGGCCGCG GTCCAGGTGT TCCACGTGCG CGGCGGACGG
ATCCGGGGGC AGCGCGGCTG GGTCGTGGAC CGGGTCGAGG ACGTCGACAC CGCCGGCCTG
GTCGAGCACT TCATGCAGCA GCTCTACGGC TCCGAGCAGG GCGAGCCCGG GATCGACACC
GAGACCGTGC CGCGCGAGAT CCTGGTCCCG GAGCTGCCCG GCAGCGTGGA GGCCATAACG
GAATGGCTGT CCGCGCGGCG CGGCGCCAAG GTCGAGGTCC GGATCCCCAA GCGCGGGGAC
AAGGCCGCGC TGATGGAGAC CGTCGCGCAG AACGCCAAGC AGGCCCTCGC GCTGCACAAG
ACCCGCCGCG CCTCGGACCT GACCACGCGC TCGGTCGCGC TGCAGGAACT CGCCGACGCC
ATCGGCATGG ACCAGGCGCC GCTGCGCATC GAGTGCTACG ACATCTCCCA CCTGCAGGGG
ACCAACGTCG TCGCCTCCAT GGTGGTCTTC GAGGACGGTC TGCCGCGCAA GAGCGAGTAC
CGCCGCTTCA CCATCAAGGG CTCCGATGAG AACGGCGCCA CCAACGACGA CGTGCGCAAC
ATGCACGAGG TCATCACCCG CCGCTTCAAG GCCTTCCTGA AGGAACAGGA GGAGGAGAAG
CTGATCGACG CGACCATCGG CGATCGCAAG AAATTCTCCT ATCCTCCGCA GCTGGTCGTC
GTCGACGGCG GCCAGCCGCA GGTCGCGGCC GCCGCGCGGG CCCTGGCCGA CCTGGAGATC
AGCGACGTCA CCCTGGTCGG CCTGGCCAAG CGCCTGGAGG AGGTCTGGCT GCCGGACGAG
GACGACCCGG TCCTGCTCCC GCGCAGCTCC GAGGGCCTGT ACATGCTCCA GCGGGTCCGG
GACGAGGCGC ACCGCTTCGG CATCGCCTTC CACCGGCAGA AGCGCTCCAA GTCCATGGTC
GCCAGCGCCC TGGACGATGT GCCCGGTCTG GGGGAAGTAC GGCGCAAAGC CTTGTTGGCC
CACTTCGGAA CACTTCGCAA ACTGCGCGCG GCACAAGTGG CAGAAATCGC TGAAGTGCCT
GGTATCGGGC CTGCCACCGC GCGGCAGATC CACTCGGCGC TCGCAGAGCT TCCGGTAAGT
CGTGCTGTGA ACGCCGCGAC AGGTGAGATC CTGGACGGGG GAGAGAGCAG GAACGGGCCG
GACGAGGAGT GA
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| Protein sequence | MADPATYRPK PGEIPTSPGV YKFRDPHSRV IYVGKAKNLR SRLTSYFQDL ANLHVRTQTM
VTTAASVEWT TVATEVEALQ LEYTWIKQFE PRFNVKYRDD KSYPSLAVTV GEEFPRAQVM
RGPKRPGVRY FGPYSHAWAI RETLDSLLRV FPIRTCSSGV FKRAAQTGRP CLLGYIGKCS
APCVGRVSAE EHREIVDDFV SFMAGRTDRY IRGLEEEMKE AAKELEFEKA ARLRDDLQAL
KQSLEKNAVV LGDGTDADVI ALSEDPLEAA VQVFHVRGGR IRGQRGWVVD RVEDVDTAGL
VEHFMQQLYG SEQGEPGIDT ETVPREILVP ELPGSVEAIT EWLSARRGAK VEVRIPKRGD
KAALMETVAQ NAKQALALHK TRRASDLTTR SVALQELADA IGMDQAPLRI ECYDISHLQG
TNVVASMVVF EDGLPRKSEY RRFTIKGSDE NGATNDDVRN MHEVITRRFK AFLKEQEEEK
LIDATIGDRK KFSYPPQLVV VDGGQPQVAA AARALADLEI SDVTLVGLAK RLEEVWLPDE
DDPVLLPRSS EGLYMLQRVR DEAHRFGIAF HRQKRSKSMV ASALDDVPGL GEVRRKALLA
HFGTLRKLRA AQVAEIAEVP GIGPATARQI HSALAELPVS RAVNAATGEI LDGGESRNGP
DEE
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