Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_5607 |
Symbol | pgk |
ID | 8336967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 6462383 |
End bp | 6463576 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644958711 |
Product | phosphoglycerate kinase |
Protein accession | YP_003116307 |
Protein GI | 256394743 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.160159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACCC TCGACGACCT CGACGTCGCC GGCAAGAAGG TCCTGCTGCG CTCGGACCTG AACGTCCCGC TGGACGGGGA CCGCATCACC GACGACGGCC GCATCCGGGC TTCGGTCCCG ACTATCAACG CGCTGCTGGA CAAGGGCGCC CGGGTGATCG TCGCGGCGCA CCTGGGCCGC CCGAAGGGCG AGCCGGAGGC GAAGTACAGC CTCGCGCCGG TGGCCAAGCG CCTCGGCGAG CTGCTGGACG CCTCGGTGAC CTTCGCCTCC GACACCGTCG GGGAATCGGC GCAGGCTGCC GTCGCCGCGA TGCCGGAGCG CTCGGTGGTG CTGCTGGAGA ACGTGCGCTT CAACGCCGGC GAGACGGCCA AGGACGACGC CGCGCGCGGC GCGTTCGCCG ACCAGCTGGC CGCGCTGGCC GACGTGTTCG TCTCCGACGG CTTCGGCGCG GTGCACCGCA AGCACGCCTC GGTCTACGAC ATCGCCACCC GGCTCCCGGC CGGCGCCGGC CTGCTGATCC AGGCCGAGGT CACGGTCCTG AAGAAGCTCA CCGACGACGT CGCGCGCCCC TACGCGGTGG TCCTGGGCGG CTCGAAGGTC TCCGACAAGC TCGCGGTCAT CGCGAACCTG CTGGAAAAGG CCGACAGCAT CCTGGTCGGC GGCGGCATGC TGTTCACCTT CCTGAAGGCG CAGGGCTTCG AGGTCGGAAA GTCGCTGCTG GAGGAGGACC AGCTCGACAC GGTCAAGGGC TACCTGCGGC GCGCCGCCGA GCGCGGCGTG GAGTTCGTCC TGCCGATCGA CATCGTCGCG GCCACGGAGT TCTCCGCGAG CGCCGACCAC GAGGTGGTCT CGGCCTCGGC GATCCCGGCC GACCGGCTGG GCCTGGACAT CGGCCCGGAG TCCGGAAAGC TGTTCGCCAA CAAGCTCTCC ACCGCCAAGA CCATCTTCTG GAACGGCCCG ATGGGCGTGT TCGAGATGGA GCCGTACGCC GGCGGCACGC GCGCCGTCGC CCAAGGCCTG ATCGACTCCG ACGCGTTCAC CGTGGTCGGC GGCGGCGACT CGGCGGCGGC GGTGCGGCAG CTGGGCTTCG ACGAGGCCTC CTTCGGCCAC ATCTCCACCG GCGGCGGCGC GAGCCTGGAG TACCTGGAGG GCAAGACCCT CCCGGGCCTG GCCGTGCTTG AGGAAGGGAA CTGA
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Protein sequence | MKTLDDLDVA GKKVLLRSDL NVPLDGDRIT DDGRIRASVP TINALLDKGA RVIVAAHLGR PKGEPEAKYS LAPVAKRLGE LLDASVTFAS DTVGESAQAA VAAMPERSVV LLENVRFNAG ETAKDDAARG AFADQLAALA DVFVSDGFGA VHRKHASVYD IATRLPAGAG LLIQAEVTVL KKLTDDVARP YAVVLGGSKV SDKLAVIANL LEKADSILVG GGMLFTFLKA QGFEVGKSLL EEDQLDTVKG YLRRAAERGV EFVLPIDIVA ATEFSASADH EVVSASAIPA DRLGLDIGPE SGKLFANKLS TAKTIFWNGP MGVFEMEPYA GGTRAVAQGL IDSDAFTVVG GGDSAAAVRQ LGFDEASFGH ISTGGGASLE YLEGKTLPGL AVLEEGN
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