| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5603 |
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| Symbol | |
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| ID | 8336963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 6459093 |
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| End bp | 6460223 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644958707 |
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| Product | ABC transporter substrate-binding protein |
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| Protein accession | YP_003116303 |
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| Protein GI | 256394739 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.069875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.939883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCTG CCATATCCAA GAAATCGGCT GCGACGAAGA TGCTGATCGT GGCCGCCGCC
GGCGCCCTGA GCCTGACCGC GCTGAGCGCC TGCTCGTCCT CGAAGAGCTC GAGCAGCTCC
GCGGCCTCCG GCACCGCCGG CGTCTCGAAG ACCACGCAGC ACGTCACGCT GATGGTCGGC
GGCATCGACA AGCAGATCTA CCTGCCCTAC AAGCTCGCCG ACCAGCTCGG CTTCTACAAG
AAGTACAACG TCGACGTCAC GCTGAGCACC GAGCAGGACG GCGGCGTCGG CGCCGAGGAG
GCCATGGTCT CCGGCCAGGT CGACATGGCC GGCGCGTGGT ACAACCACGC GATCGACTTC
CAGATGAAGC ACAAGAACGT CGAGGACCTC GTGCAGCTCT CCGGTGCCCC CGGCGAGCGC
GAGATGTGCG GCAACAAGGC CACTGTGCAC ACCGGGGCAG ACTTCGCGGG CAAGACGATG
GGCGTCACCG ACCTGGGCTC GGGCACCGAC ACCCTGACCC AGCTGATCGC GGCGCAGAGC
GGCGTGGCCA AGAACAAGTT CAGCCGCACC GGCGTCGGCG CCGGCTCCAC GGCGCTGGCC
GCGCTGAAGA ACGGCTCCAT CTCCTGCGTC ATGACCACCC AGCCGACGGT CACCGCCATC
GAGAAGCAGA ACCTCGGCTA CTCCGCGATC GACCTGGCCA CCACCGAGGG CGCCACCAAG
GCCCTGGGCG GCGCGTGGCC CGCGGCCGGC GTGCTGGCCC GCACCGACTG GGCCAACCAG
CACCAGGAGG CCGTGCAGGA CGTGGTGGAC GCCCTGGTGG CCACCATGCA CTGGATCAGC
ACGCACTCGG CGACCGACAT CGCCAACGCC CTGCCGGCGA GCTACACGAA CAACGCGATC
ATCTCCAAGG CCGACTACAT CGCCGGCCTG ACCATGGACA AGAGCCAGTT CCTGCCCGAC
GGCATCATGC CCGCCGGCGG CCCGAAGGTG GTCCTGACCA CCGAGAAGCT GATCGGCAAC
GCCGACGACT CGGTGAACCT CGGCGCCACG TTCACGAACA CCTACGCGAT CAAGGCCAAC
CAGCTCGAGG GCTTCACGAC CACCACGACG CCGGCCGGTC CCACCGGCTG A
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| Protein sequence | MSSAISKKSA ATKMLIVAAA GALSLTALSA CSSSKSSSSS AASGTAGVSK TTQHVTLMVG
GIDKQIYLPY KLADQLGFYK KYNVDVTLST EQDGGVGAEE AMVSGQVDMA GAWYNHAIDF
QMKHKNVEDL VQLSGAPGER EMCGNKATVH TGADFAGKTM GVTDLGSGTD TLTQLIAAQS
GVAKNKFSRT GVGAGSTALA ALKNGSISCV MTTQPTVTAI EKQNLGYSAI DLATTEGATK
ALGGAWPAAG VLARTDWANQ HQEAVQDVVD ALVATMHWIS THSATDIANA LPASYTNNAI
ISKADYIAGL TMDKSQFLPD GIMPAGGPKV VLTTEKLIGN ADDSVNLGAT FTNTYAIKAN
QLEGFTTTTT PAGPTG
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